Gene Francci3_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3293 
Symbol 
ID3904079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3899962 
End bp3900321 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID637880618 
Productputative transcriptional regulator 
Protein accessionYP_482379 
Protein GI86741979 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0763403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA GCGCGAGGCG CGGTCCCTAC GTCTGCGGCA TAGACGCCGG TATGGACGTG 
GTGTCAGGGA AGTGGAAGTC GCTGATCCTC TGGGAGCTGA ACAACCACGG AACCCGGCGG
TTCGGAGAGC TGCGGCGCGG CCTTCCCGGC GTCAGCGAGA AGATGCTCAT CCAGCACCTG
CGCGAGATGG AGGAGGACGC CCTGGTCCAT CGCGAGGTGT ATCGCCAGGT CCCGCCCCGG
GTCGAGTACT CCCTCACCGA GCATGGCATC TCACTCAACG AGGCCCTCCG CCCGCTAGGC
GAATGGGGGA AACGACGTTG CGAGCGCCTC GCCGTCGAGG ACGCGCTCGA ATCCGCGTAA
 
Protein sequence
MATSARRGPY VCGIDAGMDV VSGKWKSLIL WELNNHGTRR FGELRRGLPG VSEKMLIQHL 
REMEEDALVH REVYRQVPPR VEYSLTEHGI SLNEALRPLG EWGKRRCERL AVEDALESA