Gene Francci3_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3205 
Symbol 
ID3906171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3798520 
End bp3798927 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID637880529 
ProductNusB antitermination factor 
Protein accessionYP_482291 
Protein GI86741891 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.073957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCGA GCGCCGTGCC GGAGATCCTC GCTGCCCGGC TGGCCCAGTC CGATCCACCG 
GTGTCGGAAT ACGCCGTCGA GCTGGTCGAG GGGGTCGTCG AGCGCCGCGG GGAGATCGAC
GAGCGGATCG CCCGGTACGC CGAGGGTTGG ACGTTGGAGC GGATGCCGCC GGTCGACCGC
AACATTCTGC GGATTGCCGT GCTGGAACTG CTCTGGCGTC CCGACGTCCC GGATCGGGTC
GCCATCGACG AAGCCGTGGA ACTGGCGAAG AACCTCTCCA CCCACCGGTC GCCGGCGTTT
GTCAACGGGC TGCTCGCGAG TCTGGTCGAG GGAAAGGGCC TGGCCACCCC GGCCGAGTCG
ACCGGACGGG GATCGGCGGT GGATTCAATT CCCGGCCAGC CGTCGTAG
 
Protein sequence
MRASAVPEIL AARLAQSDPP VSEYAVELVE GVVERRGEID ERIARYAEGW TLERMPPVDR 
NILRIAVLEL LWRPDVPDRV AIDEAVELAK NLSTHRSPAF VNGLLASLVE GKGLATPAES
TGRGSAVDSI PGQPS