| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3052 |
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| Symbol | |
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| ID | 3904252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3618256 |
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| End bp | 3619125 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637880372 |
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| Product | phage integrase |
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| Protein accession | YP_482138 |
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| Protein GI | 86741738 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.378569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCG AGACGGGTGA GCGCGGCGCG CTTGGCCGCC ACCTCGCCGC GAACGGCGGC
CCGGCCGACC CGGCCGAGTT GGAACGCTCC CACGTCGAAG CCTTCCTGGC GGACTACGCG
GCCACCCACG CCCCGGCAAC CGTGTCCCTC GTCTTCCGGG CGTTGCAGCA GTTCGGCCAG
TGGCTCGCCG AGGAAGAGGA TCTCGACCGG TCGCCGCTCG ACCGGATGCG CCCGCCCGTC
GTCCCCGAAC AGCCGGTGCC CGTTCTCACC GACGATCAGA TCCGGACTTT GCTCGCCGGC
TGTGCCTGCC GGGACCTGGT GTCCCGCCGC GACGAGGCGA TCATCCGCCT GTTCATGGAC
ACCGGTGCGC GTCGCGCCGA GATCGCGAAC CTCACCGTCG AAGACGTCGA CTTCACCCAG
GACGTGATCC ACATCGTGGC GAAGGGCCGC CGGGCCCGTG CCGTCCCGTT CGGGACGGGC
CAGCGACCCC GGGAGGCCGG GCCGGCACAC CACGCACGGA GAATGGGCAG CATGAAGATT
CGGCTCGAAG GCAGCGACCG TGCTCGCCGA GGTCATGGAT GTGATCAGGG TGTCGTCCCC
GGAGGGGGAC CGTCGGTACA GCGCCGTCCG GATGCACCTC GAAGTGCGGC TTCGGGCTGG
CGGCCGCGGC GAGGCGGAGG ACCCGGCCGC GTAAAGCCTG TTCGACACGC TCCGCCAGGC
CACGGAGGCG GTCCGGTCTG TGTGCGCCGA CCGTGGATGT TGACCTTCCC GGCTCCGCGA
AGGTCAACAT CGGCCACCCG GGGGTTCTTT CGCAGTTCCT TCGCACTTCT TTCGCAGCGA
GGGAAGGCGG GCCGACCGCG GGTGTTCTGA
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| Protein sequence | MIVETGERGA LGRHLAANGG PADPAELERS HVEAFLADYA ATHAPATVSL VFRALQQFGQ
WLAEEEDLDR SPLDRMRPPV VPEQPVPVLT DDQIRTLLAG CACRDLVSRR DEAIIRLFMD
TGARRAEIAN LTVEDVDFTQ DVIHIVAKGR RARAVPFGTG QRPREAGPAH HARRMGSMKI
RLEGSDRARR GHGCDQGVVP GGGPSVQRRP DAPRSAASGW RPRRGGGPGR VKPVRHAPPG
HGGGPVCVRR PWMLTFPAPR RSTSATRGFF RSSFALLSQR GKAGRPRVF
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