| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3012 |
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| Symbol | gltD |
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| ID | 3904365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3573463 |
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| End bp | 3574905 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880332 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_482098 |
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| Protein GI | 86741698 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.183003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC CGACCGGCTT CCTCAAGCAC CGCAGGGAGC TGCCGAAGCG CCGTCCCGTG
GACGTCAGGA TCACCGACTG GCGCGAGGTG TACGAGTCGT TCCCCGAGGA GCATCTGCGC
ACGCAGGCCA GCCGGTGCAT GGACTGCGGC ATCCCGTTCT GTCACGAGGG CTGTCCGCTC
GGGAACATCA TTCCGGAATG GAACGACCTG ACCCGGCGCG GCGACTGGGT GGACGCCATC
GAGCGGCTGC ATGCGACGAA CAACTTCCCC GAGTTCACCG GGCGGCTGTG CCCGGCGCCG
TGCGAGGCGG CCTGCGTGCT CGGCATCGGC GACGATCCGG TGACCATCAA GCAGATCGAG
GTCAGCATCA TCGACCGCGC CTGGGCCGAC GGCACCGTGG TCCCGGTTCC GCCGTCGCTG
CGTACCGGCA AGCGGGTGGC GGTCGTGGGC TCCGGCCCGG CCGGTCTCGC CGCCGCCCAG
CAGCTCACCC GGGCCGGCCA CGAGGTCGTG GTCTACGAAC GGGCCGACCG GATCGGCGGC
CTGCTCCGCT ACGGCATCCC CGAGTTCAAG ATGGAGAAGC GGGTCTTGGA CCGCCGGCTC
GCGCAGATGG CGGCCGAGGG CACGTCGTTC GTCACGTCCT GCAACGTCGG CCTCGACATC
TCCGCGGACG AGCTGCGTTC CTCCCACGAC GCGGTGGTCC TCGCCGGCGG ATCGACGGTC
GGCCGGGACC TGCCCGTTCC CGGCCGCCAG CTGGGTGGCG TCCAGCTGGC GATGGAGTTC
CTGGTGCCCG CGAACCGGGT CGCGCAGGGG GACCTGCCCG AGTCGCCCAT CTCCGCCAAG
GGCAAGAACG TGGTCATCAT CGGCGGCGGT GACACGGGCG CGGACTGCCT GGGCACCTCC
CACCGCCAGG GCGCGCTCTC CGTGCACCAG CTCGAGATCA TGCCCCGGCC GCCGGAGCTG
CGGGCCCCGG CCAACCCGTG GCCGTCGTAC CCGATCATCT ACCGGGTCTC CAGCGCGCAC
GAGGAGGGCG GCGAGCGGGT CTTCGCCGTC TCCACCGAGC GCTTCCTCGG TGACGAGGAC
GGCAACGTGC GGGCGCTGCG CATGCACGAG GTGCGCCTCG TCGGCGGGAA GTTCGAGAAG
GTCGAGGGTA CCGACACCGA GCTGCCCTGC CAGCTGGTGC TGCTCGCCAT GGGGTTCACC
GGTCCGGAAC GGTCCGGCCT GCTGACCGAT CTCGGGGTGG AGCTGGACGC GCGCGGCAAC
GTGGCGCGCG ACGCCGGGTG GGCCTCCTCG GTCCCCGGCG TGTTCGTCGC CGGGGACATG
GGACGCGGGC AGTCGCTGAT CGTCTGGGCG ATCGCCGAGG GACGTGCCGC GGCCGCCGCC
ACTGACCGCT GGCTGATGGG CAGGACGGAC CTGCCCGAGC CCATCACGCC GACGCGTCGC
TGA
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| Protein sequence | MADPTGFLKH RRELPKRRPV DVRITDWREV YESFPEEHLR TQASRCMDCG IPFCHEGCPL
GNIIPEWNDL TRRGDWVDAI ERLHATNNFP EFTGRLCPAP CEAACVLGIG DDPVTIKQIE
VSIIDRAWAD GTVVPVPPSL RTGKRVAVVG SGPAGLAAAQ QLTRAGHEVV VYERADRIGG
LLRYGIPEFK MEKRVLDRRL AQMAAEGTSF VTSCNVGLDI SADELRSSHD AVVLAGGSTV
GRDLPVPGRQ LGGVQLAMEF LVPANRVAQG DLPESPISAK GKNVVIIGGG DTGADCLGTS
HRQGALSVHQ LEIMPRPPEL RAPANPWPSY PIIYRVSSAH EEGGERVFAV STERFLGDED
GNVRALRMHE VRLVGGKFEK VEGTDTELPC QLVLLAMGFT GPERSGLLTD LGVELDARGN
VARDAGWASS VPGVFVAGDM GRGQSLIVWA IAEGRAAAAA TDRWLMGRTD LPEPITPTRR
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