Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3002 |
Symbol | |
ID | 3905499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3556292 |
End bp | 3558799 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637880322 |
Product | WD-40 repeat-containing serine/threonin protein kinase |
Protein accession | YP_482088 |
Protein GI | 86741688 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.774494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.214944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGGGA CGACACCACC TCCGCTGCCC GGCGACGCCG TGCGCCCGCT TCAGCTGACC GATCCGCGGC GGCTCGGGGT CTACCAGGTG ATCGGCCGGC TCGGGCAGGG CGGCATGGGC ACCGTCTTCC TCGGCCGGGC ACCCGACGGA AGCGCCGTCG CGATCAAGAT GATCAGGCCG GAGCTCGCGC AACGGCCCGA ATTCCGCGCC CGGTTTGCCC GCGAGGCCGA GAGTGCTCGT CGGGTCCGCC GGTTCACCAC GGCCGCCGTG CTGGACGCTG ATCCGTACGG GCCCCAGCCC TATCTCGTGA CCGAGTTCGT CGAGGGTCCG ACGCTGTCGA GGCGCGTCTC CGTACGGGGG CCGCTGCGGC CCGCCGATCT CGAACAGCTC GCGGTCAGCG TGACGACCGC CCTGAGCGCC ATCCACGCGG CCGGGATCGT GCACCGCGAC CTCACCCCCG GCAACGTCCT GCTGTCCCCG GTCGGCCCCA AGGTGATCGA CTTCGGCCTG GCCCGCGAGT TCAACGCGGA CACCGACCTG AGCCACAACG TCCGGCACGC CATCGGTACG CCCGGTTACA TGTCCCCGGA GCAGATCCTC GACGCACCGA TCACCTCGGC GGTCGACATC TTCGCCTGGG GCGCCGTCAT AATCTTCGCC GCCACCGGGC ACGCGCCGTT CGGCACCGGT CGCATCGACG CCATTCTCTA CCGCATCGTC AACGAGCCGC CGCGGCTCGA CGGAGTTGGC GGCGAGTTGC GCAACCTCGT CGAGATCGCG ATGGCGAAGG ACCCGGCGGC CCGGCCGAGC GCGGAGGAGC TGCGGACGGC GCTGATCGGC GGGGGTACCC TCCCCGCGCG CCCGGAGCCC GGCTCCATAC CGTCCGGACC GCCCGGCGCC GGGCCCACCG GACGTGCCCG CCGCTGGGCT CGGCGCCGGC CGTCAGGCGC CGCGGGGTCG GCGCCCAGGT CGGAGCCGCC GCCCCGCGGC ACGGGCAGCA CCGGCAGCAC CGGCGGTACC GCCGCGAACG TGGCGGACAT GCCCGTCACC CAGCTGTCCC CGCCGCCTGT CGCCTCGCCG CCGCCGATCC CAGCCCGGAC CCCGCCGCCG ATACCGGCCC GGACCTCCCC GCCGCGTGGA CAGCCCGGGT CGGTACCCCC GCATCCAGCA GGAACCCCAC ACCCGCCGGC ACCCAGCCCA TCACCGGCCC CATCCAGGCT GCGGTGGTCT CGGACGGCAC TGCTCGTCGC CGGACTCGCC ATCGCGATCA CCGCCGCAAC GGTGCTGATC ATCGTGCCGC GCGGCGGTGG CCCGTCGCCG GTGTCGGCGG CCGACCGCGC GTCCATCTCG TCGCGCCTGG CCGCGGACGC GGCGGCCCAG CGGGCCCGGC AACCGGACCT GGCCGGCCGG CTGAGCCTCG CGGCCTACCG GATCGCCCCG ACGGAGGCCG CGCGCGCGGC CGTCCTCGCG TCCTTCGCCC AGTCCACCGC CGCGCGGATC CCCGCCGGCC CCGCGGCCTT CTCCGACATC GCGCTCAGCC CGGACGGCAC GACCCTCGCC GGCACCGACG ACACCGGCAG CCTCCACCTC TGGAAGGTCG ACGCTGCCGG CCGGCCCACC GCCACCACCG GGGGCTCCGC GAACGACCAT GCGCACGGCG TCGTGTTCGA CCGCTCGGGC ACCCGACTCG CGACGGGTGG GGAGACCGAC GCCGGCCGGC TATGGGACAT CGCCGATCCG GCGCGCCCCC GGCCGCTCAG CACGCTCGAC CCCCAGGCCA CGCCGGTCCA TCGGCTCGCG TTGTCGAGCA GCGCGCATCT GCTCGTCACC GCCGGCGAGG ACTGGTCGGT GGGGCTGTGG GACGTCGCCG ACCCGGCGCG GCCCGTCTCG ATCCAGTTGC TGATCGGCCG CGCCGGGCCG GTGACGGATG TGGCACTGCG GCCGGACGGC GCCGTCCTCG CCATCGCCGG CGCCGGCGGC CCCGTGCAAC TGTGGAACGT CCGCGACCCC CGCAGGCCCG TCCAGACGGC CTCGGTGCCC GGCCACACCG GTGCGGTGAA CACCGTCGCG TTCAGTCCGG ACGGACGGCG GCTGGCCACC GGCGGCGACG ACCGGATCCT GCAGGTCTCC GACGTCGGCG ATCCCGACCA TCCGCGGGTC CTGCGCCGGC TGTCCGGCCA CACCGCCCCC GTCGCCGCCG TCGCCTTCAC CACCGACGAT CATCTGGTGA GCGCGGACGG CGGTGGCGCG GTCGCCTACT GGGACCTCTC CGCCCCCACA CCCCCGATGA CCCCCCTGGG CGTCCTGGAC GCACCCGCCC GGGCGGTGGC CGGGACCGGC ACCGAGACCG TCGCGCTGAC CACCGACAAG GGGTCGGTCC TCCTCGGGAC GCTCGACCCG GCCAGGCTGC GCCGGCTGGC CTGCGCCAAG CCGGGCGCGG CCCTGAGCCC GGCCGAATGG AGCCGGCTCG TTCCCCGCCT CCCCTACACC GACTCCTGCT CCGGTTAG
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Protein sequence | MTGTTPPPLP GDAVRPLQLT DPRRLGVYQV IGRLGQGGMG TVFLGRAPDG SAVAIKMIRP ELAQRPEFRA RFAREAESAR RVRRFTTAAV LDADPYGPQP YLVTEFVEGP TLSRRVSVRG PLRPADLEQL AVSVTTALSA IHAAGIVHRD LTPGNVLLSP VGPKVIDFGL AREFNADTDL SHNVRHAIGT PGYMSPEQIL DAPITSAVDI FAWGAVIIFA ATGHAPFGTG RIDAILYRIV NEPPRLDGVG GELRNLVEIA MAKDPAARPS AEELRTALIG GGTLPARPEP GSIPSGPPGA GPTGRARRWA RRRPSGAAGS APRSEPPPRG TGSTGSTGGT AANVADMPVT QLSPPPVASP PPIPARTPPP IPARTSPPRG QPGSVPPHPA GTPHPPAPSP SPAPSRLRWS RTALLVAGLA IAITAATVLI IVPRGGGPSP VSAADRASIS SRLAADAAAQ RARQPDLAGR LSLAAYRIAP TEAARAAVLA SFAQSTAARI PAGPAAFSDI ALSPDGTTLA GTDDTGSLHL WKVDAAGRPT ATTGGSANDH AHGVVFDRSG TRLATGGETD AGRLWDIADP ARPRPLSTLD PQATPVHRLA LSSSAHLLVT AGEDWSVGLW DVADPARPVS IQLLIGRAGP VTDVALRPDG AVLAIAGAGG PVQLWNVRDP RRPVQTASVP GHTGAVNTVA FSPDGRRLAT GGDDRILQVS DVGDPDHPRV LRRLSGHTAP VAAVAFTTDD HLVSADGGGA VAYWDLSAPT PPMTPLGVLD APARAVAGTG TETVALTTDK GSVLLGTLDP ARLRRLACAK PGAALSPAEW SRLVPRLPYT DSCSG
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