Gene Francci3_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2993 
Symbol 
ID3905490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3545565 
End bp3546770 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID637880313 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_482079 
Protein GI86741679 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.285331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTC GCCTTTTCAC CTCCGAGTCG GTCACCGAAG GCCATCCGGA CAAACTCGCC 
GACCAGATCA GCGACGCCCT GCTCGACGCG TTCCTGGCTG GCGACCCCAC CTCCCGGGTC
GCGGTGGAAA CACTGCTGAC CACCGGGCAC GTGCACGTGG CCGGCGAGGT CACCAGCTCC
GCGCACGTCG ACGTGACCGC CGTCGTGCGG CGCACCCTCA CCGACATCGG TTACGACGCC
GCCACCGGCT TCGACGGCGC GACCGTCGGC GTGCTGGTCT CGATCGGTGC CCAGTCCCCG
GACATCGCCC AGGGCGTCGA CAAGGCCTAT GAGGCACGGG TCGAGGGCGG CGAGGACACG
CTGGCCCAGC AGGGCGCCGG CGACCAGGGG ATCATGTTCG GCTACGCCAC CGACGAGACC
CCCGACCTGC TCCCGCTGCC GATCACACTG GCCCACCGCC TCGCCCAGCG GTTGTCGAAG
GTGCGTCACG ACGGCCTGCT GCCCTACCTG CGGCCGGACG GCAAGACCCA GGTGACCATC
GAATACGACG GGGACCGCCC GGTCCGGTTG GACACGGTGG TCGTGTCCGC GCATCACGCC
GCCGACGTCG ACCTGGCCAC CCGCCTGGTT CCGGACATCC GCGACCAGGT CATCGCCCCC
GAGCTCAAGC GGTTGGCCGA GGAAAACCTG GGCCTGGAGG TAGACGGCTA CCGGCTGCTC
GTGAACCCGA CCGGCCGGTT CGAGATCGGC GGCCCGATCG GCGACGCGGG CCTGACCGGC
CGCAAGATCA TCATTGACAC CTACGGCGGC TACGCCCGCC ATGGCGGCGG TGCTTTCTCC
GGCAAGGACC CGTCCAAAGT CGACCGTTCG GCCGCCTACG CGCTGCGCTG GGTCGCCAAG
AACGTCGTCG CGGCCGGCCT CGCCCGGCGG GCGGAGCTGC AGGTCGCCTA CGCCATCGGC
AAGGCCGAGC CGGTGGGCCT GTTCGTCGAG ACCTTCGGCA CCGAGACCGT GCCGGTGCCG
GAAATCGCGC GGGCCGTCTC GGAGGTCTTC GACCTGCGCC CGGCCGCCAT CATCCGGGAC
CTTGACCTGC TACGGCCGAT CTATGGGCAG ACTGCCTCCT ACGGCCACTT CGGTCGGACG
CTGCCCGACT TCACCTGGGA GCGCACGGAC CGCGCCGACG CGCTGCGCGC CGCCGTCGGC
CGCTGA
 
Protein sequence
MSRRLFTSES VTEGHPDKLA DQISDALLDA FLAGDPTSRV AVETLLTTGH VHVAGEVTSS 
AHVDVTAVVR RTLTDIGYDA ATGFDGATVG VLVSIGAQSP DIAQGVDKAY EARVEGGEDT
LAQQGAGDQG IMFGYATDET PDLLPLPITL AHRLAQRLSK VRHDGLLPYL RPDGKTQVTI
EYDGDRPVRL DTVVVSAHHA ADVDLATRLV PDIRDQVIAP ELKRLAEENL GLEVDGYRLL
VNPTGRFEIG GPIGDAGLTG RKIIIDTYGG YARHGGGAFS GKDPSKVDRS AAYALRWVAK
NVVAAGLARR AELQVAYAIG KAEPVGLFVE TFGTETVPVP EIARAVSEVF DLRPAAIIRD
LDLLRPIYGQ TASYGHFGRT LPDFTWERTD RADALRAAVG R