Gene Francci3_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2943 
Symbol 
ID3903758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3476655 
End bp3477332 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID637880264 
Producthypothetical protein 
Protein accessionYP_482030 
Protein GI86741630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.204685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGC GGACAACAAC GGGCCGGCGA TGGATCGGGG CGGTGGCGCT GCTGGCGGGC 
GCGCTGCTCG TGCCGCTGGG ATGTGGCGGC GGTGCCGGTG GCGGCGGCTC CACCGACGTC
ACCACGCCGA AGCCATCGGT GTCCGGCACC ACGCCGGTGC CTTCTCCGTC CGTGTCCTCC
CGCTCGCCGG ATGGACCGGT GGTGACGTCG CCTTCCACGA CCGCGACGCC GCGGGAGCCG
GTCTGGTCGA GCGAACCGCG CCGCGTCGAG CATCAGCTGT ACGGTAACGC GACGGTCGTC
GCGGTGCGCG GCGCGCACAA CGTCGCCGGC GGGATGGCTT TCGATCGGCT GACGATCGAG
TTCCAAGGGC AGCTCCCTGG CTACGAGGTG CGTTACGTGG CCGAGGTGCT GTCGCCGGGC
GAGGGCGTTG CGGTCCCGCT GCGGGGGCAG GCGTTCCTGG AGGTGGTGTT GTTCCCGGCC
GTGGCCCACG ATGAGACCGG TAGGTCGACG CTGCGCACAC CGCGGGCCGG CGGCGGGCTT
CCCGCGCTCG TCCAGTATCG GATGACCGGC GACTACGAGG GATACGTCCA TTTCGGCCTG
GGGGTTGACG ATCGGGTCGG CTTTCGGGTG CTCGAACTGT CGAACCCGTC GCGCGTGGTG
ATCGACCTCG CCGCCTGA
 
Protein sequence
MKVRTTTGRR WIGAVALLAG ALLVPLGCGG GAGGGGSTDV TTPKPSVSGT TPVPSPSVSS 
RSPDGPVVTS PSTTATPREP VWSSEPRRVE HQLYGNATVV AVRGAHNVAG GMAFDRLTIE
FQGQLPGYEV RYVAEVLSPG EGVAVPLRGQ AFLEVVLFPA VAHDETGRST LRTPRAGGGL
PALVQYRMTG DYEGYVHFGL GVDDRVGFRV LELSNPSRVV IDLAA