| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2940 |
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| Symbol | |
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| ID | 3903755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3471601 |
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| End bp | 3473919 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637880261 |
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| Product | protein of unknown function DUF1524 RloF |
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| Protein accession | YP_482027 |
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| Protein GI | 86741627 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1479] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0973906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCGA ACGAAACTAC TCTGGGTGAA CTCCTCCAGG GTCAGTGTCA GTACGTCGTC
CCGTTGTATC AACGCCCCTA CAGCTGGGAA CGCGCCAACC TGCGGCAACT CTGGGCCGAC
ATCACGAGCG TGGCCGCCGC CGGTCCAGCG GCAACACACT TCCTGGGTTC GCTGGTTCTC
GCGCCGAGCC CGTCAACCAC GCCGGCCGGA GTGGCGATCT GGCTGGTGGT AGATGGTCAG
CAACGGCTGA CGGCGCTGAG CATCCTGCTC TGCGCGATCC GCGATCATGT CCGAGATGAC
GATCAGATGC TCGCGGCGAA AATCGACGAT CTGTACCTCA TGAACAGGTA CGCGGCCGGA
ACCGAACGTT ACACCCTGTT ACCGACGCGA GCCGACCGGA CCGCCTGGAC CGCTCTCGTC
GAGCGGTCGC CGGAGGCAGG AGGCCGGGCG GGGATCGGCG ACGCATACCA GTTCTTCCGC
AAGGAACTCG CCGCGTTGCG CGACGCCGAC GACCCGCTGG ACGCAGCACT GATCGAGCAG
GCCGTGGTCG GTCAGCTCGC AATCGTGGAG ATCGCCGCGC ATGTCGACGA CGACGTCTAC
CGCATCTTCG AATCGCTCAA CCACACCGGC CGCCGGCTCA CCCAGGCGGA CCTGCTGCGC
AACTACCTGT TCATGCGGCT ACCCACCCGA GCGGACCGGG TGTACGACTG GCGGTGGTTC
CCACTCCAGG AACTGCTCGG TGACAGACTG GAGGATCTGG TCTGGCTCGA CCTCGTGCTC
CGCGGCGACG ACCGTGCCAC CAAGGAGACC GTGTACCAGT CGCAGCGGCA GTATCTCCAG
ACGCTGCCGG ACGAGGACGC CATCGAGCAG TGGATCTCCG AGCTGCATGC AAAGGCCCTG
CTGTTCAGCC GGATCCTCGA TCCGGACCGG GAGGAGGACC CGGTCCTGCG GCAGGCCCTG
CACCGGCTGC GCCGGTGGGG GGCGGACGTC GTCCGGCCGA TCGTCCTACA CATGCTGATC
GCGCATGCGA ATGACCGTCT CGACGCCACC GAGACCGCCG CGGCACTCCG GGTGGTGGAG
AGCTACCTGG TGCGGCGGAT GCTGGTCGGC ATCGCGAGCG CCAACAGCAA CCGCATCCTC
ATGTCGCTCG TCAAGGAGCT CGGCGACCAG ACACCGACCG CCGCCGCGGT CACGCGGGTT
CTCTCCGGCC CGCGTAAGAA GTTCCCGACC GATCAGCCTG TGAAGGAAGC CGTCCTGCTC
AATCCCTTCT ACTGGACCGG ACGCGGCCCT CAGCGCACCT ATGTGTTGCG CAGCCTGGAA
GAGGATTACG AGCATCTCGA ACCAGTCGAC TGGGGCGTGA AGCTGACGGT TGAACACATC
CTCCCCCAGT CATTGTCGAG ACCGGGATGG AAAGCGGTTC TCGACGCCGA TGCCCACGAG
GGTGAGACGC GCGACGAGCT GCACCGCAGG CTCGTCCATA CTCTGGGCAA TCTGACGCTC
ACCGCCTATA ATCCGAAACT CGCCGATCAC GAGTTCACCG AGAAGAAGAA GCTGCTGGCC
GACAGCGGGC TGGCGATGAA CCGAGAAATC GCCGGTCAGG ACAGATGGGG CCGGGAGGAG
ATCCAGAATC GTGGCCGGGC GCTCGCCGAG CGGATCGTGA AGATCTGGCC CGGCCCGGAC
GAGTCCGTAG TACCGCCGCC CCAGGACCAG CGATGGACCC TGATGAGCCG GGTACTGGCC
GCGATCCCAC CCGGCCGCTG GACCAGTTAC TCCGACGTCG CGGAGGTGAT CGGGTCCCAC
GCCGTCGCGG TGGGAGCCAA GCTGGCCAGT GCCCGGATCT CCAACGCCCA CCGCGTCCTG
CTCCTGAACG GTTCCGTCTC CCCGGACTTC CGCTGGCCCG ATCCGGAACG CACCGACGAT
CCACGGGAGA TCCTGACCGC CGAGGGTGTC ATTCTCAGCA GGTCGGGCCG GGCACTGGCC
CGCCAACGCA TGACCGCCGC CGAACTCGCC GCCGCCGCCG ATCTCGAAAC CCCGGAAGAG
AGCCAGGGCG CCGCCGGAAC CAAGGAACGT CTGTGGGCCG CCCCGGCCGC CCGGTCCGCC
GTGGGGCTCG CGGTCAGCCT GTGGCCATCA GAGCGGCGCG CGGCGGCGCC CACGGACGAT
GCGAACTCCG GCCTCTCCTA CCGGGACCGG GTCCGGGGCT GCCTGCTGGG CGGGGCGTTG
GGAGACGCGC TCGGTGCGGC AATCGAATTC CAGTCGCTTG ACGAGATCCG ACGGGAGTAC
GGGACCAGGG TGACCCGCAA AGTCTGTTTG TGCAGGTAG
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| Protein sequence | MKANETTLGE LLQGQCQYVV PLYQRPYSWE RANLRQLWAD ITSVAAAGPA ATHFLGSLVL
APSPSTTPAG VAIWLVVDGQ QRLTALSILL CAIRDHVRDD DQMLAAKIDD LYLMNRYAAG
TERYTLLPTR ADRTAWTALV ERSPEAGGRA GIGDAYQFFR KELAALRDAD DPLDAALIEQ
AVVGQLAIVE IAAHVDDDVY RIFESLNHTG RRLTQADLLR NYLFMRLPTR ADRVYDWRWF
PLQELLGDRL EDLVWLDLVL RGDDRATKET VYQSQRQYLQ TLPDEDAIEQ WISELHAKAL
LFSRILDPDR EEDPVLRQAL HRLRRWGADV VRPIVLHMLI AHANDRLDAT ETAAALRVVE
SYLVRRMLVG IASANSNRIL MSLVKELGDQ TPTAAAVTRV LSGPRKKFPT DQPVKEAVLL
NPFYWTGRGP QRTYVLRSLE EDYEHLEPVD WGVKLTVEHI LPQSLSRPGW KAVLDADAHE
GETRDELHRR LVHTLGNLTL TAYNPKLADH EFTEKKKLLA DSGLAMNREI AGQDRWGREE
IQNRGRALAE RIVKIWPGPD ESVVPPPQDQ RWTLMSRVLA AIPPGRWTSY SDVAEVIGSH
AVAVGAKLAS ARISNAHRVL LLNGSVSPDF RWPDPERTDD PREILTAEGV ILSRSGRALA
RQRMTAAELA AAADLETPEE SQGAAGTKER LWAAPAARSA VGLAVSLWPS ERRAAAPTDD
ANSGLSYRDR VRGCLLGGAL GDALGAAIEF QSLDEIRREY GTRVTRKVCL CR
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