| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2873 |
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| Symbol | |
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| ID | 3906004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3387442 |
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| End bp | 3388944 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880194 |
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| Product | L-lysine aminotransferase |
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| Protein accession | YP_481960 |
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| Protein GI | 86741560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR03251] L-lysine 6-transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0317719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.305045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGTCC CCTTGCGGTC AGCCCAGCCC TTGCGGTCAG CCCAGGTGTC TGCGTCCGGT
GCCCGGTCGG CGGACGCGAT GCCGGCGGAG GGGCTAGCGG CGGACGCAGT GCTGAGCACG
CTCGGTCGTC ACGTCCTCGT CGACGGCTTC GACCTCGTCT GCGACCTGGC GATGAGCCGC
GGCAGCGTGC TCGTCGACGC CCGTGATGGG CGGCGCTATC TCGACCTCTA CAGCTTCTTC
GCCTCGGCGC CGCTCGGGAT CAACCCGCCG GACCTCGTCA ACGACGCGGG CTTCGTCGCC
CGGCTGGGCC GGGTGGCGGT CAACAAGCCG GCGAATCCGG ACGTCGCCAC CGTCGCCTAC
GCCGAGTTCG TGCGGACCTT CGCCCGGGTC CTCGGCGATC CGCAGTTGCC GCATCTGTTC
TTCGTCGAGG GCGGGGCCCT GGCGGTGGAG AACGCGCTCA AGTGCGCCTT CGACTGGAAG
AGCCGGCACA ACGCGGCACA CGGCCGTCCC GCGGCGCTCG GCCGTCGGGT TCTGCACCTG
CGGAACGCCT TCCACGGACG CAGCGGCTAC ACCCTCTCGG TCACGAACAC CGATCCGGTC
AAGACCGAGC GTTTCCCCGT CTTCGACTGG CCGCGCATTG ACTGCCCGGC GATGATGTTT
CCCTGCGTGG GGCCGGCCCT CGACGCCGTG ATTGCCGCGG AACGTGTCGC GCTCGGCCAG
GCCGAGGCCG CCTTCGCCGC CCATCCCCAC GACATCGCCT GCTTTCTGGC CGAACCGATC
CAGAGCGAGG GCGGGGACAA CCACCTGCGG GCCGAGTTCT TGGCCGCGAT GGCCGCGCTC
TGCCGGCGCC ACGACGCGCT GTTCGTGCTC GACGAGGTGC AGACCGGTGT CGGCGCCACC
GGCTCGGCGT GGGCCTACCA GCAGCTCGGC CTGCGCCCGG ACGTCGTCGC GTTCGGTAAG
AAGGTCCAGC TCGGCGGGGT GATGGCCGGC CGGCGGGTCG ACGAGGTCGC CGACAACGTC
TTCCGCGTGC CCGGGCGGAT CAACTCCACC TGGGGTGGTG GCCTGGTGGA CATGGTCCGC
GCCACCCGCA TCCTGGAGAT TATCGAGGCA CAGGGGCTCA TGGCCCGGGC CGGCGAGCTC
GGCGTGGGCA TGCTTGCCGG GCTGACGGAG CTCGCGGCCC GCCACTCCCG GCTGCTGCGT
AATCCCCGTG GGCGCGGTCT GCTCTGCGCG GTGGACCTGC CGGGCAGCGC CGTCCGGGAC
GAGGTGCTGC GGCGGCTGCG GGTGCGCGAG GGAGTCCTCG CGCTGCCCGC CGGGGAACGG
GCCATCCGGT TCCGACCGGC GCTGACGGTG AGCGCCGAGC AGCTCGCCGC CGGGATCGCG
GCCCTCGGCC GGGTCCTCGA CGGACTGCCG GGTGGTGGAT TGGACGGGCT GGGCGGATCC
GATGGGCCGG GCGGATTAGA TAGGCCGGAT GGACCCGGTG GACCGGATGG GGGATCGTCA
TGA
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| Protein sequence | MVVPLRSAQP LRSAQVSASG ARSADAMPAE GLAADAVLST LGRHVLVDGF DLVCDLAMSR
GSVLVDARDG RRYLDLYSFF ASAPLGINPP DLVNDAGFVA RLGRVAVNKP ANPDVATVAY
AEFVRTFARV LGDPQLPHLF FVEGGALAVE NALKCAFDWK SRHNAAHGRP AALGRRVLHL
RNAFHGRSGY TLSVTNTDPV KTERFPVFDW PRIDCPAMMF PCVGPALDAV IAAERVALGQ
AEAAFAAHPH DIACFLAEPI QSEGGDNHLR AEFLAAMAAL CRRHDALFVL DEVQTGVGAT
GSAWAYQQLG LRPDVVAFGK KVQLGGVMAG RRVDEVADNV FRVPGRINST WGGGLVDMVR
ATRILEIIEA QGLMARAGEL GVGMLAGLTE LAARHSRLLR NPRGRGLLCA VDLPGSAVRD
EVLRRLRVRE GVLALPAGER AIRFRPALTV SAEQLAAGIA ALGRVLDGLP GGGLDGLGGS
DGPGGLDRPD GPGGPDGGSS
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