Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2865 |
Symbol | |
ID | 3905996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3377613 |
End bp | 3378737 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637880186 |
Product | helicase-like |
Protein accession | YP_481952 |
Protein GI | 86741552 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.115235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACCC GCGAGCTGGC CCAGCAGGTC AACGACGCGC TTGAGCCCCT GACCAAGGCG CTCAACCTCC GGCTCGCGCC GGTGTACGGC GGGACGTCCA TCAGCCGGCA GATCTCCGCG CTGCGCCGCG GTGTGCACCT GGTCGTCGCC ACCCCGGGTC GGCTCACCGA TCTGGTGGAG CGCGGCGCGT GCGTGCTGGA CGGGATCGAG ATCACGGTCC TGGACGAGGC CGACTTCATG TGTGACCTCG GCTTCCTGCC CGCGGTGAAG GCACTGCTCG ACGCCACTCC GGCGGACGGG CAGCGGCTGC TGTTCAGCGC GACGCTCGAC CGGGAGGTCG AGGTGCTCGT GCGCGACTAC CTGCCCGACC CGGTCCTGGT CGCGGTGGAC TCCGAGGTCT CCCAGGTCAC CACGCTCGCC CGGCACGCGC TCGAGGCCGT CGACCGGGCC GCGCAGGTCG CCCTGGTGAC CGCGCTCGCC GGCGGCTCGG GGCGCACCCT GGTGTTCGTG CGCACCCAGC GTGACGCCGA CTGGGTGGCC GAGTCGCTGA GCCGGGCCGG GGTGCCGGCC GAGCCGCTGC ACGGCGGAAT GCCACAGGGG GCGCGGACCC GGGCGCTGGC CGGTTTCACC GACGGCTTCT ACCGGGTGCT GGTCGCCACC GACGTCGCCG CCCGCGGCAT CCACGTTGAC GGCATCCGGC TCGTCGTGCA CCTCGGTCCG CCGGAGGACG CCAAGACCTA CCAGCACCGA GGCGGACGGA CCGCCCGAGC CGGCGCCGAC GGTGCGGACG TGCTCGTCAC CCTGCCCGCC GAACGCGGCA AGGTGCGCGG GCTGCTGCGC GCCGTCGGGA TCGAGGCGAG GCCGATCCCG ACGACCGCCG ACGATCCGAT CGTGCTCGAG CTCGCCGGGC CGCCCGCGCC CCGGATCAGC AAGGACGAGA TCCCGCTAGC CCGCACGGGC GGCGGGCGGG GACCGCGCGG CGGCGGTACG CCTCGCGGCA ACGAGCACCG GCCCGCCCGG CGAGAGGGGC ACCGGTTCGG GCGGCCGGCG ACCGGGCACG GCCGCCCGCC GCGCCGGGGC GCCGCTCCCG GAACGGCCTC CACCGCACCG GCACCGACAG CCTAA
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Protein sequence | MPTRELAQQV NDALEPLTKA LNLRLAPVYG GTSISRQISA LRRGVHLVVA TPGRLTDLVE RGACVLDGIE ITVLDEADFM CDLGFLPAVK ALLDATPADG QRLLFSATLD REVEVLVRDY LPDPVLVAVD SEVSQVTTLA RHALEAVDRA AQVALVTALA GGSGRTLVFV RTQRDADWVA ESLSRAGVPA EPLHGGMPQG ARTRALAGFT DGFYRVLVAT DVAARGIHVD GIRLVVHLGP PEDAKTYQHR GGRTARAGAD GADVLVTLPA ERGKVRGLLR AVGIEARPIP TTADDPIVLE LAGPPAPRIS KDEIPLARTG GGRGPRGGGT PRGNEHRPAR REGHRFGRPA TGHGRPPRRG AAPGTASTAP APTA
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