| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2630 |
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| Symbol | |
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| ID | 3906303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3103680 |
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| End bp | 3105488 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637879955 |
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| Product | vesicle-fusing ATPase |
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| Protein accession | YP_481721 |
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| Protein GI | 86741321 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.609425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.187495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGGTC CCCGTTCGGG CTCTGGCTCC GATGGGAGCA CGGGTCGTCC AGGTGATGCC
GAATCACGGC GGTCGGCGTA CGAGAAGGAA ACACACGAGC TCACGACGCA GGTCGCCTTC
CTGGAAGAGG AAGTGGCCAT GCTGCGGCGT AAGTTGTCCG AATCGCCCAG GCAGCTCAGG
GTGCTGGAGG AACGGCTCGC GGAGATCCAG GCGGAGTTGT CGGCTGTCAC GGGACAGAAC
GACAGGCTCG TCGCGACTCT CCGCGAGGCG CGAGACCAGA TCGTCACCCT GAAGGAGGAG
GTCGACAGGC TCGCGCAGCC GCCCAGCGGC TACGGGATCT TCGTCTCCTC CTACGAAGAC
GGCACCGTCG ACGTGTTCAC TCAGGGCAGA AAGCTCCGGG TGACCGTGTC GCCGAGCGTC
AACATCAGTG ATCTCTTGCC CGGCCAGGAG GTCATGCTCA ACGAGGCGCT GAACGTGGTC
GAGACGCGCG CGTTCGAGCG GCAGGGTGAG ATCGTCCTAC TCAAAGAGGT CCTCGAGGGT
GGGGACCGGG CGCTGGTGCT CGGTCACACC GACGAGGAGC GGGTGGTCAT GCTGGCCCAG
CCGCTTCTCG ATGGACCGAT CCGGTCCGGG GACTCGTTGT TGATCGAGTC CCGTTCCGGC
TACGCCTTCG AGCGGATTCC CAAGTCCGAG GTCGAGGAGC TCGTCCTCGA AGAGGTTCCC
GACATCGGCT ACGAACAGAT CGGCGGCCTG AAGAGCCAGA TCGAGTCGAT CCGGGACTCG
GTCGAGCTGC CGTTCCTGTA CAAGGAGCTC TACCGGGAGC ATCAGCTCAA GCCACCGAAG
GGTGTGCTGC TCTACGGCCC GCCCGGCTGC GGCAAGACGC TGATCGCCAA GGCGGTCGCC
AATTCGCTGG CCAAGAAGGT CGAGGCGAAG ACCGGCGGCC AGGGCACCGG TCGGGCGTTC
TTTCTGAATA TCAAGGGTCC CGAGCTGCTC AACAAGTTCG TCGGCGAGAC CGAGCGGCAG
ATCCGGCTGG TGTTCCAGCG GGCGCGTGAG AAGGCGTCCG AGGGAATGCC GGTGATCGTG
TTCTTCGACG AGATGGACTC GATCTTCCGG ACCCGTGGCT CGGGGGTGTC CTCGGACGTG
GAGAACACGA TCGTCCCGCA GCTGCTCAGC GAGATCGACG GCGTCGAGCA GCTCGAGAAC
GTCATCGTGA TCGGCGCGTC CAACCGCGAG GACATGATTG ATCCGGCGAT CCTGCGGCCG
GGTCGGCTCG ACGTGAAGAT CAAGGTGGAG CGGCCCGATG CCGAGGCGGC TCGGGACATC
TTCGCCAAGT ACGTCGTGCC GGAGCTGCCG CTCTACCCGG ATGACCTGGC CGAGTTCGGC
GGTAACCGGG AGGCGACCGT TCAGGCCATG ATCCAGCGCG TGGTCGAGCG GATGTACGCG
GAGAGCGAGG AGAACCGCTT CCTCGAGGTG ACCTACGCCA ACGGCGACAA GGAGGTCCTG
TACTTCAAGG ACTTCAACTC CGGCGCGATG ATCGAGAACA TCGTCGCCCG GGCCAAGAAG
ATGGCGGTCA AGGAGCACAT CGAGGGCGGG CAGAAGGGGC TGCGCATGCA GTACCTGCTC
GCCGCCTGCA TGGACGAGTT CAAGGAGAAC GAGGACCTCC CGAACACGAC CAACCCGGAC
GACTGGGCCC GGATCTCCGG GAAGAAGGGC GAGCGGATCG TCTACATCCG CACGCTCGTC
ACCGGAACGA AGGGTACCGA GGCCGGCCGT TCGATCGACA CGATCGCGAA CACCGGCCAG
TACCTGTAA
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| Protein sequence | MSGPRSGSGS DGSTGRPGDA ESRRSAYEKE THELTTQVAF LEEEVAMLRR KLSESPRQLR
VLEERLAEIQ AELSAVTGQN DRLVATLREA RDQIVTLKEE VDRLAQPPSG YGIFVSSYED
GTVDVFTQGR KLRVTVSPSV NISDLLPGQE VMLNEALNVV ETRAFERQGE IVLLKEVLEG
GDRALVLGHT DEERVVMLAQ PLLDGPIRSG DSLLIESRSG YAFERIPKSE VEELVLEEVP
DIGYEQIGGL KSQIESIRDS VELPFLYKEL YREHQLKPPK GVLLYGPPGC GKTLIAKAVA
NSLAKKVEAK TGGQGTGRAF FLNIKGPELL NKFVGETERQ IRLVFQRARE KASEGMPVIV
FFDEMDSIFR TRGSGVSSDV ENTIVPQLLS EIDGVEQLEN VIVIGASNRE DMIDPAILRP
GRLDVKIKVE RPDAEAARDI FAKYVVPELP LYPDDLAEFG GNREATVQAM IQRVVERMYA
ESEENRFLEV TYANGDKEVL YFKDFNSGAM IENIVARAKK MAVKEHIEGG QKGLRMQYLL
AACMDEFKEN EDLPNTTNPD DWARISGKKG ERIVYIRTLV TGTKGTEAGR SIDTIANTGQ
YL
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