| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2571 |
|---|
| Symbol | |
|---|
| ID | 3904063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3029279 |
|---|
| End bp | 3030532 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637879896 |
|---|
| Product | recombinase |
|---|
| Protein accession | YP_481662 |
|---|
| Protein GI | 86741262 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA GCACCTGCCC ACCGGCCAGG CCCGCCTCGC ACGACGAGCA CCCGGTCGGC
TCGTCCGCCC GTAACCGGCG GTCCGGGGCC GGGTCCCCGG GGCAGCCCGG CACCCGGGTG
ACCCGGCTGC CCGCCCGGCT TCCTGTCCTT CGAACGGACC CGCTCCGAGG CCGGCCGGAC
CTGCCGGCCC CCGGCCTCCC CGTCCCCGCC TGCCGGATCG TCGTCACCCT CAAGGCGCGG
CAGTCCCTGG ACACCTCCAA GCGGGTTCGG CGCAAGCACC TCGCCATGGC CCAGGCCGGC
ATTACCGTCG GGGGCAACCG TGCCTTCGGC TGGCTGGCCG ACAAGGAAAC CAAGGACGAA
CCGGCGGCGG CGCTCCTGGT CGCGGGGGCG GATCAGATCT TGGCCGGCGT CGGCCTCCAC
ACCATCTGTC GCCAGTGGAA CGATCTTGGC ATCGCCAGCG CCATGGGCAA GAAGTGGCAA
AAACCCGTCC TGCGCAACAT CTACCTGTCC CCGCGCATCG TCGGCTACCG GGTGTACGGC
CCGACCTCCG TCCCGCTGGA GAAGCGCTAC GTGGTGGACG CGGACGGCCA GCCGGTCAAG
GGCCAGCAGC AGCCCATCCT GGACCTGGAT GTCTGGGAGG CGGTGGTGGC GAAGCTCCGC
GACCCCAGCC GGGTTTCCAA GCACGTCCAC ATCGGCGGAC GGAAGTATCT GCTGTCCGGG
ATCATCTGCT GCGGGTTCCG CGGCCGCCAC CTGATGGGCG GCTACGACCG GCGGTGGGGC
AAGCACCACT ACGCCTGCAA GGCCGTCACC GCGGGCGGGT GCGGCAAGGT CGGCGTCACA
GGCCGCCATG TTGATGACCT TGTCTCCGAG CTGGTCCTGG CCTACCTGGC AGGCCGCGAC
GTCGAGGCCG AGGTGGGCAG GTGGCCAAGG GCGGGCGAGT TGGCCAAGGC GGAGGCCAAG
ATCGCGAAAC TCATGGGTGC CTATGACCGG GACGAGCTGC CCGGCCCGTA CGTCTTCCCC
CGTGTGCGCG AGCAGGAGCA ATCCATCCTG CACCTGAGGG CGGAGCAGGC CGAGTGGCTA
CGCGCCCACA CCGGCCCCAA GGTCACGAAC CTGGCCGAGG GCTGGCCCTC TTTGGAGCTG
GAGCAGCGCT GGGAGATCAT TAGTACCGTC ATCGAGGCCG TCGTACTGAA GGCGGCTGAC
GGCCCAACGA ACCGCTTCGA CCCCGAACGG GTGGAAGTGG TCTGGCGTCC CTGA
|
|---|
| Protein sequence | MSASTCPPAR PASHDEHPVG SSARNRRSGA GSPGQPGTRV TRLPARLPVL RTDPLRGRPD
LPAPGLPVPA CRIVVTLKAR QSLDTSKRVR RKHLAMAQAG ITVGGNRAFG WLADKETKDE
PAAALLVAGA DQILAGVGLH TICRQWNDLG IASAMGKKWQ KPVLRNIYLS PRIVGYRVYG
PTSVPLEKRY VVDADGQPVK GQQQPILDLD VWEAVVAKLR DPSRVSKHVH IGGRKYLLSG
IICCGFRGRH LMGGYDRRWG KHHYACKAVT AGGCGKVGVT GRHVDDLVSE LVLAYLAGRD
VEAEVGRWPR AGELAKAEAK IAKLMGAYDR DELPGPYVFP RVREQEQSIL HLRAEQAEWL
RAHTGPKVTN LAEGWPSLEL EQRWEIISTV IEAVVLKAAD GPTNRFDPER VEVVWRP
|
|---|
| |