Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2520 |
Symbol | |
ID | 3904664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2976786 |
End bp | 2978435 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637879850 |
Product | methane monooxygenase |
Protein accession | YP_481616 |
Protein GI | 86741216 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCGTC AAAGCTTGAC AAAGGCACAC AAAAAGATCA CGGAGCTGTC ATGGGAACCG ACGTTCGCGA CGCCCGCGAA GCGGTTTGCC ACCGACTATA CCTTCGACAA GTCTCCGAAG AAGGACCCGC TCAAGCAGAT CTTGCGCTCC TACTTCCCGA TGGAGGAGGA GAAGGACAAC CGCGTGTACG GCGCGATGGA CGGCGCGATT CGCGGCAACA TGTTCCGCCA GGTCCAGCAG CGCTGGATGG AGTGGCAGAA GCTCTTCCTG TCGATCATCC CGTTCCCGGA GATCTCCGCG GCCCGGGCGA TGCCGATGGC GATCGATGCC GTCCCCAACC CTGAGATCCA CAACGGGCTC GCGGTACAGA TGATCGACGA GGTGCGTCAC TCGACGATCC AGATGAACCT CAAGCGCCTG TACATGAACC ACTACATCGA TCCGGCCGGC TTCGACATCA CTGAGAAGGC GTTCGCCAAC AACTACGCCG GAACGATCGG CCGCCAGTTC GGTGAGGGCT TCATCACCGG TGACGCGATC ACCGCGGCGA ACATCTACCT GACCGTCGTC GCCGAGACGG CGTTCACCAA CACCCTGTTT GTCGCGATGC CGTCCGAGGC GGCCGCCAAC GGTGACTACC TGCTACCGAC GGTGTTCCAC TCGGTCCAGT CCGACGAGTC TCGCCACATC AGCAACGGGT ACTCCATCCT GCTCATGGCG CTCGCCGACG AGGCCAACCG GCCGCTGCTC GAGCGTGACC TGCGCTACGC GTGGTGGAAC AACCACGCCG TGGTGGATGC CGCGATCGGC ACCTTCATCG AGTACGGCAC GAAGGACCGC CGCAAGGACC GCGAGAGCTA CGCGGAGATG TGGCAGCGCT GGATCTACGA CGACTACTAC CGCAGCTACC TCATCCCGCT CGAGAAGTAC GGCCTGGTGA TCCCCCACGA CCTGGTCGAG GAAGCCTGGA ACCGTATCTA CAACAAGGGG TACGTGCACG AGGTCGCGCA GTTCTTCGCC ACCGGATGGC CGGTGAACTA CTGGCGGATC GACCCGATGA CCGACGACGA CTTCGAGTGG TTCGAGTCGA AGTACCCGGG CTGGTACAAC AAGTACGGCA AGTGGTGGGA GAACTACAAC CGGATGCGTT ACCCCGGCCG GAACAAGCCC ATCGCGTTCG AGAACGTCGA CTACCAGTAC CCCCAGCGGT GCTGGACGTG CATGGTGCCC TGCGTGATCC GCGAGGACAT GGTGCATGAC AAGGTGGACG ACCAGTGGCG CACCTACTGC TCCGAAGCCT GTCACTGGAC TGACAAGGTG GCGTTCCGGC CGGAGTACCA GGGCCGCCCG ACGCCGAACA TGGGCCGGCT GACCGGCAAG CGGGAGTGGG AGACTCTTTA CCACAACTGG GATCTCGCCG ATGTCATTTC CGACCTCGGG TACGTCCGTG ATGACGGCAA GACCCTGATT CCGCAGCCCC ATCTCGAGCT CGACGACCCC TCGAAGCTCT GGACGCTCGA CGATGTCCGC GGCATCACGT TCAGCAGTCC GAATGTCGCA CTCAACGAGA TGAACGACGC CGAGCGTGAG GCGGCGATGG CGGCCTACCG GGCCGGCGGT CCGGCTGGTC GGCCGGCACC CGTTTCCTAA
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Protein sequence | MSRQSLTKAH KKITELSWEP TFATPAKRFA TDYTFDKSPK KDPLKQILRS YFPMEEEKDN RVYGAMDGAI RGNMFRQVQQ RWMEWQKLFL SIIPFPEISA ARAMPMAIDA VPNPEIHNGL AVQMIDEVRH STIQMNLKRL YMNHYIDPAG FDITEKAFAN NYAGTIGRQF GEGFITGDAI TAANIYLTVV AETAFTNTLF VAMPSEAAAN GDYLLPTVFH SVQSDESRHI SNGYSILLMA LADEANRPLL ERDLRYAWWN NHAVVDAAIG TFIEYGTKDR RKDRESYAEM WQRWIYDDYY RSYLIPLEKY GLVIPHDLVE EAWNRIYNKG YVHEVAQFFA TGWPVNYWRI DPMTDDDFEW FESKYPGWYN KYGKWWENYN RMRYPGRNKP IAFENVDYQY PQRCWTCMVP CVIREDMVHD KVDDQWRTYC SEACHWTDKV AFRPEYQGRP TPNMGRLTGK REWETLYHNW DLADVISDLG YVRDDGKTLI PQPHLELDDP SKLWTLDDVR GITFSSPNVA LNEMNDAERE AAMAAYRAGG PAGRPAPVS
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