Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2391 |
Symbol | |
ID | 3906374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2769013 |
End bp | 2770068 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637879721 |
Product | luciferase-like |
Protein accession | YP_481487 |
Protein GI | 86741087 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03559] probable F420-dependent oxidoreductase, Rv3520c family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.452621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0183444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGTACG TGCGTATCGC GATGTCGCTG GGGTACAGCG GAGGTTTCGA GGAGACCGTC TCGGGGCTCG CCGACTACGA GAAGGCCGGG CTCCAGGTCG TCCAGGTCGC CGAGGCCTAC AGCTTCGACG CGGTCAGCCA GCTGGGGTTC CTCGCCGCCC GGACCTCACG CGTCGAGATC GCCTCGGGGA TCATGCAGCT CTACACGCGC ACCCCGAGCC TCATCGCGAT GACCGCCGCG GGCCTCGACT TCGTCTCGCG CGGGCGGTTC ACCCTCGGGA TCGGCGCGTC GGGGCCGCAG GTCATCGAGG GTTTCCACGG CGTCCCCTAC GATGCCCCGC TGGGCCGGAC CCGCGAGACC ATCGAGATCT GCCGGAAGGT CTGGCGCCGG GAGGTCCTCG AGTACCACGG CCATCACTAC GACATCCCGC TCACCGCGGG GCGGGGGACC GGCCTCGGCA AGCCCTTGAA GATCATTAAT CGACCGGTGC GGGACCGGAT CCCGATCGTG CTGGCCGCGC TCGGTCCGAA GAACGTCGAG CTCGCCGCCG AGCTCGCCGA GGGTTGGATG CCCGCCTTCT ACCTGCCGGA CAGCGCGGAC GAGGTGTGGG GCGAGGCGGT GCGGGCCGGT ACGGCCAAGC GGGACCCGGC GCTCGGCACC CTGGACGTCT GGGCCGGGGC GTCCCTGGCC GTCGGCGACG ACGTCACCGC GCTGCGCGAC ACCGACCGGC CGCAGCTCGC GCTGTACATG GGGGGCATGG GCGCGCGGGG CCGCAACTTC TACAACGACC TGGCTCACCG CTACGGCTAC GCCGCGGAGG CGAAGCTTGT CCAGGACCTC TACCTCGCGG GTCGTAAGGA GGAAGCCGCC GCCGCGGTGC CGGCCGGCCT GCTGGAGAGG CTCTCCCTGA TCGGGCCGCG CGGCTGGGTG GCCGAACGGC TCGCCGTGTT CGCGGAGTCC GGGGTCACGA CGCTCGCCGT CAATCCGGTG GCGCCGACGC ACCTGGAGCG GGTGCGTCTC ATCGAGCAGA TCCGCGAGCT CGCCGACGGC CTGTGA
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Protein sequence | MAYVRIAMSL GYSGGFEETV SGLADYEKAG LQVVQVAEAY SFDAVSQLGF LAARTSRVEI ASGIMQLYTR TPSLIAMTAA GLDFVSRGRF TLGIGASGPQ VIEGFHGVPY DAPLGRTRET IEICRKVWRR EVLEYHGHHY DIPLTAGRGT GLGKPLKIIN RPVRDRIPIV LAALGPKNVE LAAELAEGWM PAFYLPDSAD EVWGEAVRAG TAKRDPALGT LDVWAGASLA VGDDVTALRD TDRPQLALYM GGMGARGRNF YNDLAHRYGY AAEAKLVQDL YLAGRKEEAA AAVPAGLLER LSLIGPRGWV AERLAVFAES GVTTLAVNPV APTHLERVRL IEQIRELADG L
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