Gene Francci3_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2387 
Symbol 
ID3904594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2763088 
End bp2763744 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID637879717 
Producthypothetical protein 
Protein accessionYP_481483 
Protein GI86741083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0136297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0170325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACC TCGCGTATCT CACCGCGGCG TTCGCGCTAT GGCGCCTCCT GCGGCGCCAT 
AGCGGCGTGC CGGCCAGCGT CGCGTTCATG CCGCCGCTCG CGGTGCTGAT CGGGGTCGGC
AGCTTCGCGT TCCACACGCT GGCGACCAGG TGGGCCCAGG TTCTGGACAT CGCGCCCATC
GGCCTGTTCG TGTTCATCTA TGTCGGAAGT TTCCTGCGTT GGTTCTACCG GCTGCCTTGG
ACGTGGTGCC TGGCCGGCGT GGCCGGGTTC GCCTGTGTGA CCGCCGCGTT CATCGCCCTC
CTCGGCAGCC AGATCCCCAA CCGTTCCGCA CCGTACGTGC CGGTGTTGCT GCTCATGATC
GGGCTGACCG TGGCACTGTA CGGGTCACAC CATGAGGACC GGTCCAGGTA CTGGCGGGAC
TTCGCGACGG CCGCCGGGGT GTTCTCGGCA GGCCTGCTCG CCCGCACGAT CGACGAGGAG
GCCTGCGGGT CCTTCCCGAT CGGCACGCAC TTCATCTGGC ACCTGCTCAC CGAGCTGCTG
ATCTTCGTGG TCGGCCGCGC CCTCGCGCGC CGCTGGCACT CACTCGCCGA GGCTGGTGAT
ACTCGGCTCC CGGCCACGCC CGCGGGCAGG TCCCGGTCGA CTGACTATCG CGCATGA
 
Protein sequence
MSNLAYLTAA FALWRLLRRH SGVPASVAFM PPLAVLIGVG SFAFHTLATR WAQVLDIAPI 
GLFVFIYVGS FLRWFYRLPW TWCLAGVAGF ACVTAAFIAL LGSQIPNRSA PYVPVLLLMI
GLTVALYGSH HEDRSRYWRD FATAAGVFSA GLLARTIDEE ACGSFPIGTH FIWHLLTELL
IFVVGRALAR RWHSLAEAGD TRLPATPAGR SRSTDYRA