Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2282 |
Symbol | |
ID | 3904816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2662235 |
End bp | 2663584 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637879613 |
Product | major facilitator transporter |
Protein accession | YP_481379 |
Protein GI | 86740979 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000302645 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000646359 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTCCC AACCCATCGC CACCGGCCTT CCCGCCGACC AGACCGGCCA GACCGGCGCC GCCGGTTACG GGACCCCGTC CTCGGCCACC GCCCCGGTAC CGGCGGTGGC CCTGCCGCGG CAGGCCGCGG CCCGCGACGC CCCGTCCGAC CCGGGCGCGG CGCCCCACCG GGGCAGGCTG TCCCCGCGCG CCGGATTCCT CCTGCAGACG TCGATGATCG GCTCGTTCCT CGCCGCGTCC TCGGCCCCCA CCCCCCTCTA CCCGGTCTAC CAGGCCCGCT GGGGGTTCTC CCCGATCACC GTGACCGTCG TGTTCGCCGT GTACGCCCTG GCCGTCCTCG CTGCGCTGCT CACCGTCGGA GCCCTCTCCG ACCACATCGG GCGCCGTCCG GTGCTGCTCG CCTCCTCGCT GCTGCTCGCC GCCGCCCTGG CGGTGTTCGC CACCGCCGGC GGGGTGGGGG AACTGACCGT CGGCCGCGTT CTGCAGGGCC TGGCGACCGG CGCCGCCAGT GGCGCCCTCG GCGCCGGCCT GCTCGACCTC GACCGGGCCC GCGGCACCCT GGCCAACGGA GTCGGCCCGT TCACCGGCCT GGCCCTGGGC GCCCTCGGGT CCAGTCTGCT CGTGGCCTAC CTGCCCGCTC CCACCCGTCT GGTCTACCTG GTGCTGTGCG CGATCGTGCT CGCCCAGGCG GTCGGGGTCG CGGCGATGCC CGAGACCGCA CCGCGCATCC CCGGAGCGCT CGCGTCGCTG CGCCCGACCA TCGGCGTACC CGCCGCCGCC CGCCGCGACC TGCTGATCGC CGCGCCCTGC CTGGTCGCAT CCTGGGCCCT GAGCGGGTTC TACCTCTCCC TCGGCCCGAG CCTGGCCCGT CTCGTCGTCG ACTCCCGCTG GGTCGTGCTG GGAGGTCTCG CGGTCTTCGC CCTCACCGTG ACCGCGGCCC TGACGGTGCT GCTCCTGCGC GACACCGCTG CCCGTACCGT GATGTTCCTC GGTGCCCTGG GCCTGCTCGT CGGCGTCGGT GTCACCCTGC TCGGCGCGGA CCTTCCCTCC ACCCCGACGT TCTTCGTCGG CACCACGCTG GCCGGTATCG GTCTCGGCGC CGGTTTCCAG GGCGGCCTGC GCGTCCTGAT CCCCCTGGTC GCCCCGCACG AACGCGCCGG CCTGCTCTCG ACCGTCTACG TGCTGTGCTA CCTCGCCTTC GGCGTCCCCG CGGTCGTCGC CGGCTACCTG GTCACCCACC ACGGGCTGCT GCCCACCGCC CGCGGGTACG GCCTGGTCGT CATGGCCCTC GCCGCGCTGG CGCTTCTCGG CCTGCTCACC CGCGCCCGGC GCCCGGCGCC CGGCGCCTGA
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Protein sequence | MSSQPIATGL PADQTGQTGA AGYGTPSSAT APVPAVALPR QAAARDAPSD PGAAPHRGRL SPRAGFLLQT SMIGSFLAAS SAPTPLYPVY QARWGFSPIT VTVVFAVYAL AVLAALLTVG ALSDHIGRRP VLLASSLLLA AALAVFATAG GVGELTVGRV LQGLATGAAS GALGAGLLDL DRARGTLANG VGPFTGLALG ALGSSLLVAY LPAPTRLVYL VLCAIVLAQA VGVAAMPETA PRIPGALASL RPTIGVPAAA RRDLLIAAPC LVASWALSGF YLSLGPSLAR LVVDSRWVVL GGLAVFALTV TAALTVLLLR DTAARTVMFL GALGLLVGVG VTLLGADLPS TPTFFVGTTL AGIGLGAGFQ GGLRVLIPLV APHERAGLLS TVYVLCYLAF GVPAVVAGYL VTHHGLLPTA RGYGLVVMAL AALALLGLLT RARRPAPGA
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