Gene Francci3_2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2227 
Symbol 
ID3906366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2600772 
End bp2601116 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content71% 
IMG OID637879558 
Producthypothetical protein 
Protein accessionYP_481324 
Protein GI86740924 
COG category[S] Function unknown 
COG ID[COG3462] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.572683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCT GGGATGGGCA CACCTGGGGC TGGGGCGGCT GGCTGCTGAT GTCGTTCAGC 
ATGGTCGTCT TCTGGGGGCT GGTGATCGGG GTACTGGTTG CTCTCCTGCG CGCGGGCCGC
GGCGGCGGGC CGGGTACGTC GGCCGAACCG CCCGGAGTGG AACGGCCCGG TACCGAACGG
CCCGGTACCG AACGGCCCGG TACCGAACGG CCCGGCGAGC GGTCGGCCGA GCGGATCCTC
GCCGAGCGTT ACGCCCGCGG TGAGATCGAT GAGGCGGAGT ACCACCGCCG CCTGGACGTG
TTGCGTGAAC GGCCCGGCCC GACGGATCTC ACCAGGGCTG GCTGA
 
Protein sequence
MMIWDGHTWG WGGWLLMSFS MVVFWGLVIG VLVALLRAGR GGGPGTSAEP PGVERPGTER 
PGTERPGTER PGERSAERIL AERYARGEID EAEYHRRLDV LRERPGPTDL TRAG