| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2214 |
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| Symbol | |
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| ID | 3906353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2589766 |
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| End bp | 2590545 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637879546 |
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| Product | undecaprenyl pyrophosphate synthetase |
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| Protein accession | YP_481312 |
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| Protein GI | 86740912 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.498647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGATGA CGGCCGGCCC CCTCTACGCG CTCTACACCC GTCGCCTGCG TCGGCAGGTC
ATGGCGGGTC CACTGCCTGC GCACGTCGGG CTGGTCATGG ACGGCAACCG CCGCTGGGCC
CGCGAGATGG GCATGGCGAA TCCGAGCCTC GGCCACAAGT ACGGCGCCGA GCACGCCGAG
GACGTCCTGT CCTGGTGCGA GCTTGTCGGC ATCAAACACG TCACCGTGTT CGTCTGCTCG
ACGGAGAACC TGCAGCAGCG CGGGGACGCC GAGGTCGCCT TCCTCATGCA GGTGATCGAG
CAGGTGGTGG CCGACCGGCT CGGGCGGCCG GACGCCCGCT GGCAGGTCCA TCTCGCGGGC
ATGCTGGACA CGCTGCCGGA CAGCACGGCC CGTGTCCTCA AAGAGGCCGT GGAGACAACC
CGCAGCGTCA CGACCGGCGC CCACGTCACC CTCGCCGTCG GGTACGGGGG TCGCCAGGAG
GTCATCGAGG CCCTGCGCGA GCTGCTGCAC GAGCGGGCCG AGGCCGGGGA CTCGCTGACC
GACGTCGCGT CGACGCTGAC CGTGGACGAC ATCGCCCAGC ACCTCTACAC CGCCGGCCAG
CCCGACCCCG ATCTGGTGAT CCGCACCAGC GGGGAACAGC GGCTGTCCAA CTTCCTGCTC
TGGCAGAGCG CCTACTCGGA GCTGTATTTC TGCGAGGCGT ACTGGCCGGC GTTCCGTGAG
ATCGACTTCC TGCGCGCCCT GCGCAGCTTC GCCGCCAGGG AGCGACGCCA CGGCGCCTGA
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| Protein sequence | MQMTAGPLYA LYTRRLRRQV MAGPLPAHVG LVMDGNRRWA REMGMANPSL GHKYGAEHAE
DVLSWCELVG IKHVTVFVCS TENLQQRGDA EVAFLMQVIE QVVADRLGRP DARWQVHLAG
MLDTLPDSTA RVLKEAVETT RSVTTGAHVT LAVGYGGRQE VIEALRELLH ERAEAGDSLT
DVASTLTVDD IAQHLYTAGQ PDPDLVIRTS GEQRLSNFLL WQSAYSELYF CEAYWPAFRE
IDFLRALRSF AARERRHGA
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