Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2167 |
Symbol | |
ID | 3906767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2538233 |
End bp | 2539432 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637879500 |
Product | butyryl-CoA dehydrogenase |
Protein accession | YP_481266 |
Protein GI | 86740866 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.592182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.710802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAGGA TCGCGCAGAC CGACGGTCTG ACCGAAGTGC AGCGGGACAT CCTTGCGGCG GTACGGACCT TCGTCGACAA GGAGATTCTT CCCCATGCGA ACGACCTCGA GCATCGGGAT GAGTATCCCG AGGACATCAT CGAGGCGATG AAGGAGATGG GCCTGTTCGG CATCACCATC CCGGAGGAGT ACGGCGGGCT CGGCGAGTCC CTGCTGACCT ACGCGCTCGT CGTGGAGGAG ATCGCCCGCG GCTGGATGAG TGTCTCCGGG GTCATCAACA CCCACTTCAT CGTCGCCTAC CTGATCCTCC AGCACGGCTC GGAGGAGCAG AAACGGCGGC TGCTCCCGGT CATGGCCACC GGCGAGCTCC GCGGGGCGTT CTCGATGAGC GAACCGGGCT GTGGCTCCGA CGTTTCCGCG ATCACCACCC GGGCCGACCG GGACGGCGAT GAATACGTGC TCAACGGCCA GAAGATGTGG CTGACGAACG GCGCCCGCGC CGGCGTCGTC GCCACCCTGG TCAAGACCGA CGAGGGTGCC CAGTCGGTCT ACCGGAACAT GACGACGTTT CTCCTGGAGA AGGAACCTGG GTTCCGGACA CACGGCGGGA TCACCATCCC GGGAAAGCTG GAGAAACTCG GGTACAAGGG GGTCGAGACC ACCGAGATGG TGCTGGCCGA CCATCGGGTG CCCGCGTCGG CGATCCTCGG CGGCGAGGCC GGCCGGGGCC AGGGCTTCTA CCAGATGATG GACGGCGTGG AGGTCGGCCG GGTCAACGTC GCCGCGCGGG CCTGCGGGAT CATGATCCGG GCGTTTGAGC TGGGTATCGC CTACGCTCAG CAGCGGCGGA CGTTCGGCCG GCCCATCGCG GAGCATCAGG CCATCGCGTT CAAGCTCGCC GAGATGGCGA CCAAGGTGGA GGCCGGGCAT CTGATGATGG TCAGCGCCGC CCGCAGGAAG GACGACGGGC AGCGCAACGA CGTCGAGGCC GGGATGGCCA AGTACCTTGC CAGCGAGTAC TGCCACGAGG TGACGACCGA GGCTTTCCGG ATCCACGGCG GCTACGGCTA CTCCAAGGAG TACGAGATCG AGCGCCTGTA CCGGGAGGCC CCCTTCATGC TCATCGGAGA GGGGACCTCC GAGGTACAGA AGCGCATCAT CAGCCGGGCA TTGCTGAAGG AGTACCAGCT TCCGGGCTGA
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Protein sequence | MGRIAQTDGL TEVQRDILAA VRTFVDKEIL PHANDLEHRD EYPEDIIEAM KEMGLFGITI PEEYGGLGES LLTYALVVEE IARGWMSVSG VINTHFIVAY LILQHGSEEQ KRRLLPVMAT GELRGAFSMS EPGCGSDVSA ITTRADRDGD EYVLNGQKMW LTNGARAGVV ATLVKTDEGA QSVYRNMTTF LLEKEPGFRT HGGITIPGKL EKLGYKGVET TEMVLADHRV PASAILGGEA GRGQGFYQMM DGVEVGRVNV AARACGIMIR AFELGIAYAQ QRRTFGRPIA EHQAIAFKLA EMATKVEAGH LMMVSAARRK DDGQRNDVEA GMAKYLASEY CHEVTTEAFR IHGGYGYSKE YEIERLYREA PFMLIGEGTS EVQKRIISRA LLKEYQLPG
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