Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2106 |
Symbol | |
ID | 3905633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2472387 |
End bp | 2473823 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637879441 |
Product | putative replication initiation protein |
Protein accession | YP_481207 |
Protein GI | 86740807 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.612009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.44749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTTTCCG TGGATGTGGG CGTGAGCCTG CCCGAAAACC GGCCGGTCGC GGGTGGCTGT TCCCGTCCGA TCCGCCTGTC CGGCCATGTC GATCATGTGG ATGTCGGGAC CGGTGAGATC CGCCGTGCGC TGTCCGGGAA GGATCTGCCG GGCGGGGTGC TGCATGTGCG GTGCGGCAAC CGGCGGGAGT CCGCGTGCCC GGCCTGTTCG GCGGTGTACA AGCGGGACGC CCGGCGGCTG GTCCTGGCCG GGCTCGCGGG CGGCAAAGGC GTACCAGAGA CCGTCACGAC GCATCCGGCG TGGTTCGTGA CGTTGACCGC TCCGACCTTC GGGCCGGTGC ATTCCCGCCG TCAGCAGGGC GGTAAGGGCG GTCCGGTGCG GGCCTGCCAC CCCCGGCGGG GGCTCTGCCC CCATGGCCGT CCGGCAGGCT GTCATGAGCG GCACCGCGAG GATGATTCCC GGCTCGGTTC CCCGATCTGC CCGGACTGCT ACCAGTACGG CCGGGCCGTG ACGTGGAACG CGCTGGTACC TCGGCTCTGG AAAACGACAC GCGACGCGAC GGAATCCGCG GTCGCGGCTG CTGCGGGTCT GACGGTGGCG GGGCTACGCC GCTCGGCGCG GCTGAGCTTC GTCAAGGTCG CGGAAATGCA GGCGCGGGGC GTGGTGCATC TGCATGTGGT GGTCCGGGTC GACGGGCCGG ACGGGCCTGG CTCGTCTCCT CCTGGCTGGG CGGATGGTGA TCTGGTCGCG GACGCGCTGC GGGACGTCGT CGGGTCGGTC GCGGTAGCTG CTCCGGATCC GGACATGGGC ACCCTCGACG GCACCGCATC GGCTGACGGG TGGGCGGTGC GCTGGGGTGT CCAGGTCGAC ATCCGGCGCA TCGCGCTCGA CGGACCCACC GATGTCGGAC GGATCAGTAA CTATCTGGCG AAGTACCTCA CCAAGTCGGC GGCGGCCGGC GGGGCGCTGG ATCATCCGGT GCGGTCGCTG GCCGCGCTGG GCCGGCTGAT CCTGGCGCCG CATGTGCGCC GTCTGGTGGA GACCTGCTGG CGGCTCGGCC ATGATCCGGT GTTCACCGCG GCGTTGGATG CGGCACTCGG CCGGGATTCC GGCGATATCC CACGGCTACT GCGGTGGGCG CATCAGATGG GGTTCGGTGG CCACTGGCTG ACGAAATCGC GGACCTACTC GACGACGTTC ACCGCGCTAC GGACGGTACG GCGGGTGTGG TCGCGCACGA TCGGCGCGGC GATGGCGGGC CGTGTCCCGG TGGACGCCTT CGGCCGGGCT GAGGGCGATG AGAACACGAT CGTTCTCGGG GCGTGGACGT ATACGGGCCG GGGGCTAGAC CTCGGCGGAC ACGGGGCTGA CCCTCCCGAG TTGCGGTCGT CGCGGACGGC TGGTAGCCCG GTGGGCAATG GGCCGGCTGA GAGATGA
|
Protein sequence | MFSVDVGVSL PENRPVAGGC SRPIRLSGHV DHVDVGTGEI RRALSGKDLP GGVLHVRCGN RRESACPACS AVYKRDARRL VLAGLAGGKG VPETVTTHPA WFVTLTAPTF GPVHSRRQQG GKGGPVRACH PRRGLCPHGR PAGCHERHRE DDSRLGSPIC PDCYQYGRAV TWNALVPRLW KTTRDATESA VAAAAGLTVA GLRRSARLSF VKVAEMQARG VVHLHVVVRV DGPDGPGSSP PGWADGDLVA DALRDVVGSV AVAAPDPDMG TLDGTASADG WAVRWGVQVD IRRIALDGPT DVGRISNYLA KYLTKSAAAG GALDHPVRSL AALGRLILAP HVRRLVETCW RLGHDPVFTA ALDAALGRDS GDIPRLLRWA HQMGFGGHWL TKSRTYSTTF TALRTVRRVW SRTIGAAMAG RVPVDAFGRA EGDENTIVLG AWTYTGRGLD LGGHGADPPE LRSSRTAGSP VGNGPAER
|
| |