Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1998 |
Symbol | |
ID | 3903706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2348170 |
End bp | 2349399 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637879334 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_481101 |
Protein GI | 86740701 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.469724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCTC CGTCCTCCAA CCGTACGGCC TCCGGCACCC GCCGCGGACT GGCGACGGAG GCGGTGCGTG CCGGCCATCG CCAGTCCGTT GACGACCAGC ACAGCGAGGC GCTGGTACTC ACGTCGAGCT ACCTGTTCGA CGACTCGCAC GACGCGGCGG AGAAGTTCGC GCAGCGGCGC CCCGGCAACG TCTACGTCCG GTTCACGAAC CCGACGGTGC GCGCGTTCGA GGAGCGCGTC GCGCGGCTGG AGGGTGCCGA GTCCGCCGTA GCGACCGCGT CCGGGATGGC CGCATTCTTG GCGGTGTCGC TCGGGCTGCT GCGCGGCGGG GACCATGTCC TGCTTGCGGA GGGTGTCTTC GGCACCACGA CCCGGCTCTA TGCTCACTAT CTGGACCGGT TCGGCGTCAT GACGACCGTC GTTCCGGTGA CCGACCCGGC CGCCTGGGCG CGCGCAATGC GTGCGCAGAC CAGGATGCTC GTCGTTGAGA GCCCCACGAA CCCGGTAATG GCCGTGGCCG ACATCAGGTA CCTCGCAGAG CTCGCACATG CCGCCGGCGC GCTGCTGCTG GTCGACAACA CCCTGTGCAC CCCGGTGTTC CAGCAACCGA TCGTGTTTGG CGCAGACCTC GTTCTGCACT CCGCCGGCAA GTACATCGAC GGTCAGGGCC GCTGCGGCGG CGGCGTTGTC GCCGGCCGCG CGGGCCTGAT CTCCGAGCTG CACGGTGTGC TGCGCACCGC GGGCCCGAGC CTCAGCCCGT TCAACGCGTG GATCTTCCTG AAGAGCCTGG AGACGCTGCC GGTGCGGATG CGGGCGCACG ACGCCAACAC GGCGGTGGTG GCTGCCTGGC TAGCCGACCA ACCGGACGTA CGGGCGGTGC ACTACACCGG CAGCGCGGAT CACCCGCAGC GGGAGCTGGT AGCCGCCCAA CAGTCCGGGC ACGGCGGAGT GATCAGCTTC GAGCTGTACG GCGGCCAGCA GGCCAGCTGG TCGTTTGTCG ACCGGCTTGA GCTCGTGTCG AACACGACAA ACATCGGGGA CACCAAGTCG ATGATCACCC ATCCGGCAAG CACCACCCAC GGCCGGCTCA CGCCGGCACA GCGCGACTCC GCCGGCGTCA CCGACGGCCT GCTGCGCCTA TCGGTCGGCC TGGAGGACGT CGAGGACATC GTCGCCGATC TGGCCCGGGC GTTCGCAGCG ACCAGGCCTG CCGGGGCCCG CGCCCGATGA
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Protein sequence | MTPPSSNRTA SGTRRGLATE AVRAGHRQSV DDQHSEALVL TSSYLFDDSH DAAEKFAQRR PGNVYVRFTN PTVRAFEERV ARLEGAESAV ATASGMAAFL AVSLGLLRGG DHVLLAEGVF GTTTRLYAHY LDRFGVMTTV VPVTDPAAWA RAMRAQTRML VVESPTNPVM AVADIRYLAE LAHAAGALLL VDNTLCTPVF QQPIVFGADL VLHSAGKYID GQGRCGGGVV AGRAGLISEL HGVLRTAGPS LSPFNAWIFL KSLETLPVRM RAHDANTAVV AAWLADQPDV RAVHYTGSAD HPQRELVAAQ QSGHGGVISF ELYGGQQASW SFVDRLELVS NTTNIGDTKS MITHPASTTH GRLTPAQRDS AGVTDGLLRL SVGLEDVEDI VADLARAFAA TRPAGARAR
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