| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1942 |
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| Symbol | |
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| ID | 3904304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2281499 |
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| End bp | 2283292 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637879279 |
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| Product | hydrogen:quinone oxidoreductase |
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| Protein accession | YP_481046 |
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| Protein GI | 86740646 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA CCAGGCAGTC GAGAACCGGG GAGAAGCCCG CCCAGATCGT GGAGATGGCG
TGGGACCCGA TCACGCGCAT CATCGGCAAC CTCGGGATCT ACACGAAGAT CGACTTTGCC
AACCGGCGGG TCACCGAGTG TCACAGCACC TCGTCGCTGT TCCGCGGCTA TTCGGTGTTC
ATGAAGGGCA AGGATCCGCG GGACGCGGGT TTCATCACCA GCCGCATCTG CGGCATCTGT
GGGGACAACC ACACCACCTG CTCGGTCTAC GCCCAGAACA TGGCGTACGG CATCGCGAAC
CCGCCGATGG CGGAATGGAT CATCAATCTC GGAGAGGCCG CCGAGTACCT GTTCGATCAC
ACGATCTTCC AGGACAACCT GGTGTTCGTG GACTTCTGCG AGGCGATGGT CAAGCAGACC
AATCCCGGCG TGCTGGCCCG GGCAGAGGCC ACCGCCGCAC CGAACGCGGC CGTGCACGGG
ATGCGGACTA TCGCTGACAT CATGCGTTCG TTCAACCCGT TCGAGGGGGA GATCTACCGG
GAGGCCCTCA AGGTTAGCCG GATCACCCGC GAGATGTTCT GCCTGATGGA GGGCAGGCAC
GTGCACCCCT CCACGCTGTA TCCGGGCGGG GTCGGCACGA TGCCGGAACC GACGGTGTTC
ACCGACTACC TCAGCCGGCT GATGGAGATC CTTGATTTCG TCAAGAAGGC CGTCGCGTTG
AACGACGACC TGTTCGACTT CTGGTACGAG GCGCTGCCCG GTTACGAGGA GGTCGGCCGC
CGCCGGGTGC TGCTGGGCTG CTGGGGCGCG TTCCAGGATC CGAACGTCGT GGACTACCGG
TACGAGAACA TGACCACCTG GGGCCGGGCG ATGCACGTGA CACCCGGGAT CGTCGTCGAC
GGCGATCTGC TGACCACCGA CCTGGTGGAG ATCAATCTGG GTATCCGGAT CCTGCTGGGC
AGTTCCTTCT ACCAGGACTG GGTGAACGAG GAGCCGTTCG TCACCCGGGA TCCGCTCGGA
AATCCGGTCG ACATGCGCCA TCCGTGGAAC CAGACGACGC TGCCGGTGCC GCAGAAGCGG
GACTTCGGGG AGAAGTACAG CTGGGTGATG AGCCCGCGGT GGCTTGACGC CCGCAGCGGC
GAGCATCTCG CCCTGGATAC CGGGGGAGGG CCCTTCGCTC GGCTTTACAC CACGGCACTC
GCCGGACTGG TGAACACCCC CTACGTCACC GCGACCGGGG GCGCGGTGAA CATCTCGCTG
CCGCGCAGCC GCACGCTGCC CGCCGTCGAC CTGCAGTGGA AGCCGCCGGC CTGGTCGAAC
GCGATCGAGC GGGACCGGGC CCGTGTCTAC TTCGTCGCCT ACGCGGCGGC GATGGCGCTG
TACTTCCTCG AGCAGGGCAT GGATCGGGTG CGCTCGGGTG ACACCCGGGT GTTCTGCGAC
TTCGACGTGC CGGACGAGAC GATCGGCTGC GGTTTCCACG AGGCGGTGCG CGGCGTGCTG
TCGCACCACA TGGTGGTGCG CGACGGCAAG ATCGCAAATT ATCACCCCTA CCCGCCGACG
CCGTGGAACG GCAGCCCCCG CGACTTCTTC GGAACTCCGG GCCCCTACGA GGACGCGGTA
CAGAACATGC CGATCTTCGA GGAGAACGGT CCGGAGGGGT TCAAGGGCGT TGATGTGATG
CGGACGGTGC GCAGCTTCGA CCCCTGCCTG CCCTGCGGGG TGCACATGTA TCTCGGTCGG
GGCCGCACCC TGCGCACGGT GCACTCGCCG ATGTTCGGGG CCAGCCATGG TTGA
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| Protein sequence | MTTTRQSRTG EKPAQIVEMA WDPITRIIGN LGIYTKIDFA NRRVTECHST SSLFRGYSVF
MKGKDPRDAG FITSRICGIC GDNHTTCSVY AQNMAYGIAN PPMAEWIINL GEAAEYLFDH
TIFQDNLVFV DFCEAMVKQT NPGVLARAEA TAAPNAAVHG MRTIADIMRS FNPFEGEIYR
EALKVSRITR EMFCLMEGRH VHPSTLYPGG VGTMPEPTVF TDYLSRLMEI LDFVKKAVAL
NDDLFDFWYE ALPGYEEVGR RRVLLGCWGA FQDPNVVDYR YENMTTWGRA MHVTPGIVVD
GDLLTTDLVE INLGIRILLG SSFYQDWVNE EPFVTRDPLG NPVDMRHPWN QTTLPVPQKR
DFGEKYSWVM SPRWLDARSG EHLALDTGGG PFARLYTTAL AGLVNTPYVT ATGGAVNISL
PRSRTLPAVD LQWKPPAWSN AIERDRARVY FVAYAAAMAL YFLEQGMDRV RSGDTRVFCD
FDVPDETIGC GFHEAVRGVL SHHMVVRDGK IANYHPYPPT PWNGSPRDFF GTPGPYEDAV
QNMPIFEENG PEGFKGVDVM RTVRSFDPCL PCGVHMYLGR GRTLRTVHSP MFGASHG
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