Gene Francci3_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1877 
Symbol 
ID3906152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2212248 
End bp2212730 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID637879215 
Producttransposase, IS4 
Protein accessionYP_480982 
Protein GI86740582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.524457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGCAT CTGCCGTCCG AGTTCGGGGT GTCGGTACCC ACGGCGCACC GTCGGTTCCA 
GGCGTGGACC CGGGCGGGTG TCTGGCCTCG ACCGCACCGC AAGATCTTGG ACCTGCACGG
TGTGGCCGGA CGGGTCGACT GGTCATCGGC GATCGTGGAC GCGGCCAGCC TGCGAGCGAA
AAAGGGGGAA GCCTGACCGG TCCGAACCCG GTCGACCGCG GCAAACCGGG CTCGAAGATC
CATCAGCCGG AACGACGGCG TTTCCTGCGT CGGCGCGGTA TCGCGGTGCG GATCGCCCGC
CGTGGTGTGG ACAGTACCGA ACGCCTCGGC CGGCACCGGT GGAAAGTCGA GAGAACCCTG
GCCTGGCTCG GTGGCTACCG CCGCCTGAGC CCGCGTTACG AACGTAACGG CTACAACTTC
CTCGGGTTCC TCTGCCTGGC TGCCGCGATC ACCTGCTGGA AGAAGCTCCC ACGCTCGACG
TAA
 
Protein sequence
MAASAVRVRG VGTHGAPSVP GVDPGGCLAS TAPQDLGPAR CGRTGRLVIG DRGRGQPASE 
KGGSLTGPNP VDRGKPGSKI HQPERRRFLR RRGIAVRIAR RGVDSTERLG RHRWKVERTL
AWLGGYRRLS PRYERNGYNF LGFLCLAAAI TCWKKLPRST