Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1877 |
Symbol | |
ID | 3906152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2212248 |
End bp | 2212730 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637879215 |
Product | transposase, IS4 |
Protein accession | YP_480982 |
Protein GI | 86740582 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.524457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGCAT CTGCCGTCCG AGTTCGGGGT GTCGGTACCC ACGGCGCACC GTCGGTTCCA GGCGTGGACC CGGGCGGGTG TCTGGCCTCG ACCGCACCGC AAGATCTTGG ACCTGCACGG TGTGGCCGGA CGGGTCGACT GGTCATCGGC GATCGTGGAC GCGGCCAGCC TGCGAGCGAA AAAGGGGGAA GCCTGACCGG TCCGAACCCG GTCGACCGCG GCAAACCGGG CTCGAAGATC CATCAGCCGG AACGACGGCG TTTCCTGCGT CGGCGCGGTA TCGCGGTGCG GATCGCCCGC CGTGGTGTGG ACAGTACCGA ACGCCTCGGC CGGCACCGGT GGAAAGTCGA GAGAACCCTG GCCTGGCTCG GTGGCTACCG CCGCCTGAGC CCGCGTTACG AACGTAACGG CTACAACTTC CTCGGGTTCC TCTGCCTGGC TGCCGCGATC ACCTGCTGGA AGAAGCTCCC ACGCTCGACG TAA
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Protein sequence | MAASAVRVRG VGTHGAPSVP GVDPGGCLAS TAPQDLGPAR CGRTGRLVIG DRGRGQPASE KGGSLTGPNP VDRGKPGSKI HQPERRRFLR RRGIAVRIAR RGVDSTERLG RHRWKVERTL AWLGGYRRLS PRYERNGYNF LGFLCLAAAI TCWKKLPRST
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