Gene Francci3_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1682 
Symbol 
ID3903069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2019048 
End bp2019296 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content69% 
IMG OID637879020 
ProductSpoVT/AbrB-like 
Protein accessionYP_480787 
Protein GI86740387 
COG category[S] Function unknown 
COG ID[COG4456] Virulence-associated protein and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.134426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.651768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGACA CGGCGATCGC GAGGCTCTTC ATGCACGGCA GAAGCCAGGC AGTGCGGCTC 
CCGAAGGAGT TCCGGCTGCC CGGTGACCGG GTGCGCGTCC GGCACATGGG AGACGGCGTG
CTGCTAGAGC CGATCGCGTC CGATGTCGAC GCCTGGTTCG CCGAGCTGGA CCGTTTCGTG
GACGTGCCGC TGTTCGAGGA CGGCAGGAAC CAGCCGCCGA CGCCCGCCGG GGAGGACTTC
TTCGGGTGA
 
Protein sequence
MADTAIARLF MHGRSQAVRL PKEFRLPGDR VRVRHMGDGV LLEPIASDVD AWFAELDRFV 
DVPLFEDGRN QPPTPAGEDF FG