| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1593 |
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| Symbol | |
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| ID | 3903728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1910030 |
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| End bp | 1912699 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878930 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_480698 |
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| Protein GI | 86740298 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.813754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAAGG CAGGCCCGTC CCTCGCAAGC TCGACTGTGT TCCTCGCCCG CCACCTTGAA
CGGCACGGTG ACCGCACGGC CGTTGTCACG GCTGAGGGCC GGCTGTCCTA CCGCGAACTG
GCGGCACGCG TCGACGCCGC CGCCGGTCGG CTCGGCGCCG GGCGGCGGCT GGTGCTCCTC
GCGGCGGTCA ACACGATCGA CGTCCTCGTC CTGTACCTGG CGGCGCTGTC CGCCGGGCAC
GCGGTCCTGC TGGTGCCGGG TGACAACGCC GCGTCGACCG ACGCCCTGAT CACGTCCTAT
GACCCCGACG TGGTGATCCG CCCGGCCGGC ACGCGGACCC GCGTCGAGCA GCGGCGGGAG
GGCTCGAAGC ACGACCTTCA TCCGGACCTC GCGCTGCTGC TGAGCACGTC GGGCTCGACG
GGCTCACCGA AACTGGTCCG GCTGTCGTAC ACGAACCTGC AGGCCAATGC CGAGTCGATC
GTCGAGTGCC TCGGCCTTCG CCCCGGCGAC CGCGCCGCGA CGACCCTGCC CCTGTACTAC
TGCTACGGGC TGTCGGTCGT GCACAGTCAC CTCCTGTGCG GGGCCGGTCT GATCCTGACG
TCCCTGTCCG TCGTGGACGC CTGCTTCTGG AACCTCTTCC GGGACGGGCA GGGAACCTCG
CTGGCTGGCG TCCCCTACAC GTTCGACCTG CTCGACAGGA TCGGTTTCGA CGCGATGTCG
CTGCCGCATC TGCGCTACAT CACGCAGGCC GGCGGTCGAC TGGCGCCGGA CCGGGTGGCC
CGCTACGCCG AGCTCGGACG ACGCAACGGC TGGGACTTCG TCGTGATGTA CGGCCAGACC
GAGGCCACGG CGCGGATGTC CTGCCTGCCG CCGCACCTCG CGCCGACCCA CCCCCACACC
ATCGGAGTCC CGGTCCCGGG CGGGTCGTTC CGGCTCGAGC CGCTGGCCGA CCGCACCGGG
AGCACCGACA GCACCGGGGA TCTGGGGCAG CTCGTCTATT CCGGGCCCAA CGTCATGATG
GGTTACGCGC GGACGGCCTC GGACCTCGCG CTCGGTCCGA CGCTCGACGA GCTGCGCACC
GGGGACGTCG CGCGCCGCAC CGATGACGGC CTGTACGAGA TCGTGGGACG GCAGACCAGA
TCCGCCAAGG TCTTCGGGAT CCGGATCGAC CTGCAACACG TGGAAGACAC CCTCGCCGGC
CAGGGGCTCA GCGCCTGCTG CGTGACCGGC GACGACGCCG TTGACGTGAT GATCGAGGGT
GACCGGGACA CGCCTTCGGT CCGCCGGCTG GTCGCGCGGG CCTGCCGGCT GCCGGAGAAC
GCCGTCCGCG TCCACCGCCT GGCCGCCCTG CCCCGCCTGG CCACCGGCAA ACCGGATCTG
GTCGCGCTGC AGGAGATCGC CCGCGACGCG CGACCGGCGC GCACGACCGC GCCCACCGGA
CGGGACGGAC CGTCGGACGG AACAGCCGAC GTACGCCGGC TGTTCGCCGA GCTGCTCCAC
CGCGACGATG TCACCGACGA CAGCACCTTC GTGAGCCTGG GCGGCGACTC GCTGTCCTAC
GTGGAACTGT CACTGCGGCT GGAGGACGCC CTCGGACACC TGCCCGCCGG CTGGCACACC
ATGGCCGTGC GGGACCTGAA GCCGGCCACG CGACCGAAGC GCCGGGCTGG CGGCTCTGGC
AGCTCGATCG AGACCAGCGT GCTGCTCCGG GCGGTTGCGA TCGTGCTGAT CGTCGGGACG
CACGCCAACA CCTTCGACGC CGTCGGCGGC ATCCTCGGGG GCGCCCATCT CCTCATCGCC
GTCGCCGGCT ACAACTTCGC CCGTTTCCAC CTGACCGCGG CGCCGCGGCG CGACCGGGTC
CGCGGGCTGC TCCGCAGCAT CGCGTACCTC GCGATGCCGA GCATCGTCTT CATCACCGTA
CTCGTGCTCG TCATGGACGA ACACGAACCC GCCAACATCG TGCTGCTCAA CAGCGTGTTC
GGGCCGGACC GCGCGGGCCC ACCCTGGGAG TTCTGGTTCG TCGAAGCCCT GGTCCAGATC
CTGCTGGTCC TCGCGGCCCT GCTCGGCGTG CCGGCGTTCG ACCGCTGGCA GCGGCGCCGC
CCGTGGGCCG TCGCCGCCGG TGTCCTCGCC GCCGGTCTGC TCACCCGCTT CGACGTCGTG
GCCCTACCGC CGGGACCACG CCACACCCAG ACGTCGGTGG CGGTGCTCTG GCTGTTCGCG
CTGGGATGGG CCACCGCCGC CGCGACCACG GTACGGCAGC GGCTGGCCCT CACCGCGGCG
GCGGCGCTCA CCATCCCCGG GTTCTTCGCT GACGCACGCC GGGAGCACGT GGTGCTCGGC
GGCGTGCTCC TGCTGGCCTG GACCACGAGC GTCCGCTGCC CACGCCCGCT GCGCCGGCTG
GCGGGCCCGC TGGCCGGCAG CTCGCTCTAC ATCTACCTGA CCCACTGGCA GGTGTTCCCC
CTTCTGCAGG ACGACCATCC GGTCCTGGCG CTGCTGGCCT CGCTCACCGT CGGCGTCGCC
GCGTGGAAGG TCTCGTTCCA TGCCATGGGC CTTCTCAGCC GGCTCACGGC GGGCGTGCCG
ATCCCACTCG GCGCCAGGCG TCCGCTCCGC GGTTCGCCCG CCAGCGCTCC CGACTTGTGC
CACTCGTCAC ATTCTACGGC GCTAAGGTAA
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| Protein sequence | MTKAGPSLAS STVFLARHLE RHGDRTAVVT AEGRLSYREL AARVDAAAGR LGAGRRLVLL
AAVNTIDVLV LYLAALSAGH AVLLVPGDNA ASTDALITSY DPDVVIRPAG TRTRVEQRRE
GSKHDLHPDL ALLLSTSGST GSPKLVRLSY TNLQANAESI VECLGLRPGD RAATTLPLYY
CYGLSVVHSH LLCGAGLILT SLSVVDACFW NLFRDGQGTS LAGVPYTFDL LDRIGFDAMS
LPHLRYITQA GGRLAPDRVA RYAELGRRNG WDFVVMYGQT EATARMSCLP PHLAPTHPHT
IGVPVPGGSF RLEPLADRTG STDSTGDLGQ LVYSGPNVMM GYARTASDLA LGPTLDELRT
GDVARRTDDG LYEIVGRQTR SAKVFGIRID LQHVEDTLAG QGLSACCVTG DDAVDVMIEG
DRDTPSVRRL VARACRLPEN AVRVHRLAAL PRLATGKPDL VALQEIARDA RPARTTAPTG
RDGPSDGTAD VRRLFAELLH RDDVTDDSTF VSLGGDSLSY VELSLRLEDA LGHLPAGWHT
MAVRDLKPAT RPKRRAGGSG SSIETSVLLR AVAIVLIVGT HANTFDAVGG ILGGAHLLIA
VAGYNFARFH LTAAPRRDRV RGLLRSIAYL AMPSIVFITV LVLVMDEHEP ANIVLLNSVF
GPDRAGPPWE FWFVEALVQI LLVLAALLGV PAFDRWQRRR PWAVAAGVLA AGLLTRFDVV
ALPPGPRHTQ TSVAVLWLFA LGWATAAATT VRQRLALTAA AALTIPGFFA DARREHVVLG
GVLLLAWTTS VRCPRPLRRL AGPLAGSSLY IYLTHWQVFP LLQDDHPVLA LLASLTVGVA
AWKVSFHAMG LLSRLTAGVP IPLGARRPLR GSPASAPDLC HSSHSTALR
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