Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1533 |
Symbol | |
ID | 3904999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1838291 |
End bp | 1838929 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637878870 |
Product | phosphoenolpyruvate phosphomutase |
Protein accession | YP_480638 |
Protein GI | 86740238 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.135262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTG TGGTACGGAC CGTGGCGAGG ACGACGCGTC ATCCGGTGGT TGTGGACATG GAATCCGGGT ACGGAGGCCC GCGCAAGGTA GACCTGGCGG CGCGGACAAT CTCCCAGGCC GGCGCGAGCG CGGTGTGCAT CGAGGACAAC ACGCTGGACA AGTGGTCGAT CCTGTACCCC GGTGAGCGGG ACCTGGCCAG CGTGGAAGAA CAGGAGAAAT GCCTCCGCGC CACGCGCCGC GGGCTGGAGC CCAGCTGTTT CTTGATCGCC CGAACCGAAG CGTTGGTGGC CGGGCACGGC GTGGCCGAGG CCTTGAACCG CGCGAACCGC TATGTGGATG CCGGCGCGGA CGCGGTGTTT GTGCAAGCCA CGCGACCCGA CGGGGGCGAG GAACTTCTGG AATTCGGCCG GGGATGGGAT CGGCGCACGC CGGTGTTCAT CGCACCAACC TGCTATCCAG CGCTCGGTGC CGAGGAGTAC GCCAGGTCCG GTATCACACA CTGGATCTTC GCGAACCAGC CCCTCCGATC TGTTGGGCGA TGGAAGACAC CGCCCAACAG ATCGGAGAAG CTAGGACCGG CCCCGCTCCA CAACTGGACG ATCAGATCGC ATCGGTGTCA GAGATCGGAG ACCTCGTGA
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Protein sequence | MASVVRTVAR TTRHPVVVDM ESGYGGPRKV DLAARTISQA GASAVCIEDN TLDKWSILYP GERDLASVEE QEKCLRATRR GLEPSCFLIA RTEALVAGHG VAEALNRANR YVDAGADAVF VQATRPDGGE ELLEFGRGWD RRTPVFIAPT CYPALGAEEY ARSGITHWIF ANQPLRSVGR WKTPPNRSEK LGPAPLHNWT IRSHRCQRSE TS
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