Gene Francci3_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1533 
Symbol 
ID3904999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1838291 
End bp1838929 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID637878870 
Productphosphoenolpyruvate phosphomutase 
Protein accessionYP_480638 
Protein GI86740238 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.135262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTG TGGTACGGAC CGTGGCGAGG ACGACGCGTC ATCCGGTGGT TGTGGACATG 
GAATCCGGGT ACGGAGGCCC GCGCAAGGTA GACCTGGCGG CGCGGACAAT CTCCCAGGCC
GGCGCGAGCG CGGTGTGCAT CGAGGACAAC ACGCTGGACA AGTGGTCGAT CCTGTACCCC
GGTGAGCGGG ACCTGGCCAG CGTGGAAGAA CAGGAGAAAT GCCTCCGCGC CACGCGCCGC
GGGCTGGAGC CCAGCTGTTT CTTGATCGCC CGAACCGAAG CGTTGGTGGC CGGGCACGGC
GTGGCCGAGG CCTTGAACCG CGCGAACCGC TATGTGGATG CCGGCGCGGA CGCGGTGTTT
GTGCAAGCCA CGCGACCCGA CGGGGGCGAG GAACTTCTGG AATTCGGCCG GGGATGGGAT
CGGCGCACGC CGGTGTTCAT CGCACCAACC TGCTATCCAG CGCTCGGTGC CGAGGAGTAC
GCCAGGTCCG GTATCACACA CTGGATCTTC GCGAACCAGC CCCTCCGATC TGTTGGGCGA
TGGAAGACAC CGCCCAACAG ATCGGAGAAG CTAGGACCGG CCCCGCTCCA CAACTGGACG
ATCAGATCGC ATCGGTGTCA GAGATCGGAG ACCTCGTGA
 
Protein sequence
MASVVRTVAR TTRHPVVVDM ESGYGGPRKV DLAARTISQA GASAVCIEDN TLDKWSILYP 
GERDLASVEE QEKCLRATRR GLEPSCFLIA RTEALVAGHG VAEALNRANR YVDAGADAVF
VQATRPDGGE ELLEFGRGWD RRTPVFIAPT CYPALGAEEY ARSGITHWIF ANQPLRSVGR
WKTPPNRSEK LGPAPLHNWT IRSHRCQRSE TS