| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1491 |
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| Symbol | |
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| ID | 3903128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1785092 |
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| End bp | 1786780 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878828 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_480596 |
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| Protein GI | 86740196 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.430715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAAGA ACGAGGAAGG CCATCCACCA ATGCCGTTAC GCATACGACT GGCGCGGGGC
GCGGGTTCCG TTCTGGTGGG CACTCTTCGG CGTGGCTGGC GGCGAGTCCG CGGGGTGACC
ACGCGGGGAG CGGGCACGAC TGCCCGGACC GGTCGCGGGG CGGCACGAGG CGAAGCGTCC
GCCCCACCCG CGAGCGCCGA ACCCGTCGGC CCCTGGATGA TCGGCCCTCC GCCGTTGGGC
CCTTATCTGG CCGGCCCTTA TCTGGCCGGC CCACGCCTGG CCGGCGCCCA CGTCACGGAA
CCTCGCCTGG CCGTGCTGCG CCTGCTCGGC CACGGCTGGA TGCTGTGGCG CGCGCCCGGG
GGGTTGATGC GGCGGGGGTT AATCGTAGTC TTCTGCTGGC TGAGCATGGC CGGGTTCGCG
GCGGCGGGTC TGCGTCCGCG ATGGACCGAC CTCGCGGCCT TCGCCACCTT CGTTGTTCTC
GGGGCGCTGG CCGTGGTGGC GTCCGGACGG CTGGGTGAGG ATCTGACCGT TCCCGGGGCC
CGACGTCATG ACCTGCTGTC CACCTGGACG GTGGCGGCGG CGGTCCTGCT GCCGCCGTTC
TACCCGGCGG TTGTCAGCCT GCCGCTGTGC TGGCTCGCCG GCCGTCGTGA TCCAGTACAG
CCGCCGCATC TGCGCGTGTT CCACGCCGCG GCGTTGGGCA TCGCGGGCTT CTGTGCCTCC
AGCGTCCATC TGCTGCTTAG CCCCGATCGA GGGCCGTTCA CCGTCGACAA CCTCGTCGGG
TCCGGCGTCG CGGTGCTGGC CTTCCTCGCC GCGGTTGCGG TTTACCCGGT TGTGGCGAGG
CTGACCGTGA CGGGGATGAG GCTGACCGTG ATGGGGATGG CGACGTCCGA TGGTCGGGAG
AGCCTCGATT CGTGCTCCGG TGTGGCGGCC GGTCCAGCCC GGCCGGGCTG GCCGGACCGG
CCGGACCGGA CCGGGGTCGT CCCGTCACCT GTCATCCCCG CCCGGACCCC GCTCCGGCAT
GCGTGCCGCG ACCTCGTGCC CGCGCAGGCC GCCGAGATCT GCTCGTCGAT CGTGGTCGCG
GTGCTGTGGG CGGCGAACCC GTTGCTCATG CTGGCGATCA CACCCCCCGT CCTGTTGCTG
CAACGCAGCC TGTTGCACGC CGAGCTCCTG CATGCCGCGC GGTCCGACGC GAAGACCCGG
CTGGCCAACC CGGCGTACTG GCGCCAGGTC GCGGAACGCG AGATCAACCG GGCCTGCCAG
GTGGGGCGTC CACTGTCGGT GCTCCTGGTC GACATCGACC ACTTCAAGCG GGTCAATGAC
AGGTTTGGTC ATCTCATCGG GGACGTCATT CTGATCGCGG TGGCGGACGC GCTGCGGGCG
GCGACCCGCC CCCGGGATCT CGTCGGACGG TTCGGGGGCG AGGAGTTCGT GGTGCTGCTC
ACCGAGGTCG AGCTGGAGAA CGCGGCCGAT GTCGCGGAAC GGATCCGCCG CCAAGTCGCC
GGAACCCACT GCCGGCTGGA GGGCCGGCCT CCCCTGTCGG TGACCGTGTC CGTGGGAGTC
GCGACACATC ACGGCCCCCG CGGCGACCTC GCCGGCCTCA TCGCCCGTGC GGACTCCGCG
CTCTACCGGG CCAAGGCCGA TGGTCGTAAC CGGGTACGGC TCGCCGGGCC GGTCTACAGC
TCCGTCTGA
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| Protein sequence | MDKNEEGHPP MPLRIRLARG AGSVLVGTLR RGWRRVRGVT TRGAGTTART GRGAARGEAS
APPASAEPVG PWMIGPPPLG PYLAGPYLAG PRLAGAHVTE PRLAVLRLLG HGWMLWRAPG
GLMRRGLIVV FCWLSMAGFA AAGLRPRWTD LAAFATFVVL GALAVVASGR LGEDLTVPGA
RRHDLLSTWT VAAAVLLPPF YPAVVSLPLC WLAGRRDPVQ PPHLRVFHAA ALGIAGFCAS
SVHLLLSPDR GPFTVDNLVG SGVAVLAFLA AVAVYPVVAR LTVTGMRLTV MGMATSDGRE
SLDSCSGVAA GPARPGWPDR PDRTGVVPSP VIPARTPLRH ACRDLVPAQA AEICSSIVVA
VLWAANPLLM LAITPPVLLL QRSLLHAELL HAARSDAKTR LANPAYWRQV AEREINRACQ
VGRPLSVLLV DIDHFKRVND RFGHLIGDVI LIAVADALRA ATRPRDLVGR FGGEEFVVLL
TEVELENAAD VAERIRRQVA GTHCRLEGRP PLSVTVSVGV ATHHGPRGDL AGLIARADSA
LYRAKADGRN RVRLAGPVYS SV
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