| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1455 |
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| Symbol | |
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| ID | 3903187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1745728 |
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| End bp | 1746840 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878792 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_480561 |
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| Protein GI | 86740161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00804434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTCGGGT TGGAATGGGA TGCCGCACGC CTTCCGCGCC TGCGCCGGGT CGGGGTCGTC
GGCACGGGCC TGATCGGGAC CAGCATCGGT CTCGCGCTGT CGGCAAGGGG CGTCGAGGTC
CTGCTCCGCG ACGTGGACGA GGCACAGGTC GCGCTTGCCG AGAAGATGGG GGCCGGGCGG
CCGTGGGCGG GGGAGCGGGT CGATCATGCG GTCGTCGCCA CCCCACTGCC GAGTGTCGCG
GTCCAGGTAC GCGCCCTGGC CCGCTCCGGC CTCGCGGACA CGATCAGCGA CGCCGGCAGC
GTCAAGGTCC GACCGTTGGT CGAGGGAGTC CAGCTCGGCT GCGACCTCAC GACGTGGTGC
CCGGCCCACC CCATCGCCGG CCGGGAACGG CACGGGGCCG TCTCCGCCCG GGCGGACCTG
TTCGCCGAGC GGGTCTGGGC GGTCTGTCCC GTCCCCCACA CCGGGTCGGC CGCGGTGCAC
GCCACGGTGG CGCTGGCGTT CGCCTGCGGG GCCACGCCGG TGCGGACCAC CCCGCAGCGT
CACGACGCGG CGATGGCGTC GGTCTCCCAC GTGCCCCAGA TCGTCGCGAG CGCGCTCGCG
GGGGCGCTCG TCGGGCTGCC GGAACGGGAC GTGCCCTTCG TCGGGCAGGG GTTCCGCGAC
ACCACCCGGC TCGCCGACAG CGACGCCGAG CTGTGGTCGG GGATCATCGA GGGTAACCGC
GGCCCGATCG CCGAGCGGGT GCGTTCCCTC GGCGCCCAGC TCACCGCGCT CGCCGACGTC
CTCGACACCG GTTCCGGTGA CGAGGTCACC GCCGCGGTCT CCCGGCTCAT GCGGGGCGGC
CAGGCCGGCC GTGCGCTGCT TCCGCGCAAG CCCGGCGCCC CGGCGCAGTC CTGGGGCTGG
GTGGGGGTCG TGCTCGACGA CCGACCCGGC CAGCTCGCCG CGCTCGTCGG CTTCATCAGC
CAGTGGCAGA TCAACATTGA GGATGTCGGG CCCTTCGAGC ACAGCCTTGA CGCACCCGCC
GGCATCGTCG AGCTCGCGGT GGATCCGACG GCCGCGGACG AGCTCGTCGA CCGGTTGACG
CTCAACGGCT GGACGGCATA CCGGCGATCC TGA
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| Protein sequence | MVGLEWDAAR LPRLRRVGVV GTGLIGTSIG LALSARGVEV LLRDVDEAQV ALAEKMGAGR
PWAGERVDHA VVATPLPSVA VQVRALARSG LADTISDAGS VKVRPLVEGV QLGCDLTTWC
PAHPIAGRER HGAVSARADL FAERVWAVCP VPHTGSAAVH ATVALAFACG ATPVRTTPQR
HDAAMASVSH VPQIVASALA GALVGLPERD VPFVGQGFRD TTRLADSDAE LWSGIIEGNR
GPIAERVRSL GAQLTALADV LDTGSGDEVT AAVSRLMRGG QAGRALLPRK PGAPAQSWGW
VGVVLDDRPG QLAALVGFIS QWQINIEDVG PFEHSLDAPA GIVELAVDPT AADELVDRLT
LNGWTAYRRS
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