Gene Francci3_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1440 
Symbol 
ID3903171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1732737 
End bp1733636 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID637878777 
Producthypothetical protein 
Protein accessionYP_480546 
Protein GI86740146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.386026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.040245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG AACGGCCGGA TGCGAGCGTC GATGCGCCGG CCGCTCCCTG GAGACCGGGG 
GCTGGGCCGA GCCAGGCCGA GGTGAAGGCG CGGCTGCTCG ACCGGCTCAC ATCACCGGAG
GCAGGCTCCC CCGTTTCCGC CGACGGCACC GAATCCGATG GCTTGGCATC CGCAGGCTCG
GCCCCTGAAG GCTCGGCGCG GCCGGAGACG GAACGTTCCA GGATCGACGC CAAGCTGGAC
GCGCTCGACC GCCGGAACAC CTCGGATGAT CGTGCCCCGT GGCCGGCCGA CCGTCGGTCG
GTAGAGGACA CGCGGTCCGC CGATCCTTCG CCGGTGGAAC GCAAGCTCGC GCTGCTCGAC
CGCGGGCCCG GCGGTGAGAT GGACGCGGCC AGGAAGCAGG ATCGGCCGGC CGGACCGGAG
AAGCTGGGGT GGCGGCTCAC GAGGATCTGG CGGGAAAGCC TCCCGACTCG AGATGGACGC
GCCTTCTTCG AGAAGTCCGA CACGGACATG CGGAGGACCG CGATGGCCGC CGAGCCGGTC
CCGGGAACCT ACACAGCCGA CCTGCATGGC GACCCGTCGG GATTCCGGGT CGGCAAGGTC
GCGCTCGACG CCCGGCAGCT CGGCGCGCTC ATCCGCGCCG ACGAGAACTG GCGCGGCCGA
CCGGTGCGGC TGCTGTCCTG CGAGACCGGG CAGGGCGACA ACCCCGTGGC CCAGAAGGTC
GCGGACGAAC TCGGGGTCGC GGTGACGGCA CCGACCGAGC TGGCCTGGGC CGACGACCGC
GGTAACGTGT GGACGACATC AATGACCGAA AATGAGTACG GTCGTCTGGT GCAAACCGTT
CCCCATGACG GCTCCTGGAT CAATTTTCAT CCGAGAGGCG AGGGCAAACA GAATGCCTGA
 
Protein sequence
MSIERPDASV DAPAAPWRPG AGPSQAEVKA RLLDRLTSPE AGSPVSADGT ESDGLASAGS 
APEGSARPET ERSRIDAKLD ALDRRNTSDD RAPWPADRRS VEDTRSADPS PVERKLALLD
RGPGGEMDAA RKQDRPAGPE KLGWRLTRIW RESLPTRDGR AFFEKSDTDM RRTAMAAEPV
PGTYTADLHG DPSGFRVGKV ALDARQLGAL IRADENWRGR PVRLLSCETG QGDNPVAQKV
ADELGVAVTA PTELAWADDR GNVWTTSMTE NEYGRLVQTV PHDGSWINFH PRGEGKQNA