| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1340 |
|---|
| Symbol | |
|---|
| ID | 3906553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 1609147 |
|---|
| End bp | 1609959 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637878673 |
|---|
| Product | inositol monophosphatase |
|---|
| Protein accession | YP_480446 |
|---|
| Protein GI | 86740046 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.758603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG ATGACACCCG CCCGCCGTCC ACCGTGCCGG TCGACATCGC GACCGACGAA
CTCGATGACG ACGTCCTGGC CCGACGGTTG GCCACGGACG CCGGCAAACT GCTGTTGCGG
ATCAGGGAGG AGGTCGGGTT CGCCGAACCC GCGACCCTGC GTGACGCCGG GGACGCGCGT
TCGCATCAGC TCCTGACCCG GGCGTTGGCG CGGCACCGCC CGCGGGACGC TGTGCTGTCC
GAGGAGGGCG TTGACGACGT CGCGCGGCTG TCCGCGGAGC GGGTCTGGAT CGTCGACCCC
CTGGACGGCA CCCGCGAGTT CGCCGAACCC GGCAGGTCGG ACTGGGCGGT GCATGTCGCG
CTCTGGCAGG CCGGCGAGCT CGTCTCGGGC GCGGTGGCGC TGCCGGCGCT CGGGTTGACG
CTGTCCAGCG CGGGCGGGCT GCCGCCGCGG CTGGCCGGGG CGCGTCCGCC ACGGATCGTG
GTCAGCCGGA CCCGGGCCCC ACAGCTGGTC ACGGAGGTCG CGGAGGCACT GGGCGCCACC
ATCGTCCCGA TGGGTTCGGC CGGTGCGAAG GCCGGCGCCG TCATCCGCGG GGAAGCCGAG
ATCTACCTGC ACGCCGGCGG CCAGTACGAG TGGGACTCCG CCGCCCCGGT GGCGGTCGCG
CGGTCGGCGG GGCTGCACAC CAGCCGGCTG GACGGCTCGC CGCTGCGGTA CAACCAGCCC
GACCCGCTGT TGCCCGACCT GGTCATCTGT GCTGCGAGCT GGGCATCGGA GGTTCTCCGG
GCGATCGGCG CCGCGGGGGG CTCCGGCGGT TGA
|
|---|
| Protein sequence | MNTDDTRPPS TVPVDIATDE LDDDVLARRL ATDAGKLLLR IREEVGFAEP ATLRDAGDAR
SHQLLTRALA RHRPRDAVLS EEGVDDVARL SAERVWIVDP LDGTREFAEP GRSDWAVHVA
LWQAGELVSG AVALPALGLT LSSAGGLPPR LAGARPPRIV VSRTRAPQLV TEVAEALGAT
IVPMGSAGAK AGAVIRGEAE IYLHAGGQYE WDSAAPVAVA RSAGLHTSRL DGSPLRYNQP
DPLLPDLVIC AASWASEVLR AIGAAGGSGG
|
|---|
| |