Gene Francci3_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1313 
Symbol 
ID3904362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1575280 
End bp1576086 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content76% 
IMG OID637878646 
Productinositol-1(or 4)-monophosphatase 
Protein accessionYP_480419 
Protein GI86740019 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.528727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.631294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TGCCAGACCC GGACGAACTG CTCGCCATTG CGCTGACGAT CGCCCGTGCG 
GCGGGTGACC TGCTCGCGCG GGGCCGGGAG GGCACCGTGG CCGCGGAGAC GACGAAGTCG
TCTCCCACCG ACGTCGTGAC CGCTCTCGAC CGCGCCTCCG AGGCGCTCGT CGCCCGGCGG
CTCGCCGAAC TGCGCCCCGG CGACGGACTG CTCGGCGAGG AGGGTTCGGA CTCCGCCGGC
ACGACCGGGG TGCGCTGGAT CGTCGACCCG CTCGACGGGA CGGTGAACTT CCTCTACCGG
CTGCCCAACT GGGCGGTCTC GATCGCCGCC GAGGTCGACG GGGAGGTCGT CGCCGGGGTT
GTGCACGCCC CGGCGCTGGG CGCGACCTAC ACCGCCACGC GGGGCGGCGG ATCGTACCGG
GACGGGGAAC CGCTGACCGG CTCCACGGTG ACGACGCTGG CCGGCGCCCT CGTCGCAACG
GGTTTCGGCT ACACGGCGTC CCGCCGGGCC GCGCAGGCCG CTGTCGCCAG CCGGGTGGTG
CCCCGGGTGC GCGACCTCCG TCGGATGGGT GCGGCCTCGC TGGACCTGTG CGCGGCGGCC
GGCGGCCTCG TCGACGCCTA CTACGAGCGT GGGCTGAAGC CCTGGGACCA GGCCGCCGGC
GGCCTGGTGG CGGTGGAGGC CGGGCTGCGG GTCGGTGGGC TGCACGGCCG CCCGGCGGGC
GAAGATCTCA CCGTCGCCGC CCCGCCGGCC CTGTTCCCGG CGCTGACCGC CCTGCTCGCC
GAGGATCCCC CCGCCGACCG CGACTGA
 
Protein sequence
MSDLPDPDEL LAIALTIARA AGDLLARGRE GTVAAETTKS SPTDVVTALD RASEALVARR 
LAELRPGDGL LGEEGSDSAG TTGVRWIVDP LDGTVNFLYR LPNWAVSIAA EVDGEVVAGV
VHAPALGATY TATRGGGSYR DGEPLTGSTV TTLAGALVAT GFGYTASRRA AQAAVASRVV
PRVRDLRRMG AASLDLCAAA GGLVDAYYER GLKPWDQAAG GLVAVEAGLR VGGLHGRPAG
EDLTVAAPPA LFPALTALLA EDPPADRD