| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1306 |
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| Symbol | |
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| ID | 3904355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1563117 |
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| End bp | 1565360 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878639 |
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| Product | oxidoreductase-like |
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| Protein accession | YP_480412 |
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| Protein GI | 86740012 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins
[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCAGG TGGTACAGGC GGCGTCCGGC GGGGCGGTGC GCGTCGTCGA CGTTCCCGTG
CCGGTCATCG GTCCGACCGA GGTGCTGGTG GCGACCGTTG CGACGATCGT GTCCGCCGGC
ACGGAACGTG CCGTTACCAC GCTCGCCCGC TCCGGGCTGC TGACCAAGGC GCGGGCCCGC
CCGGACCTTG TCCGCAAGGT CGCGGAGAAG GCGAGGACCG ACGGTCTCAT CCCGGCCGCG
CGTTCGGTCC GGGACCGGCT CGGCGCCGAC GTTCCCCTCG GCTACAGCGG ATGTGGTCGC
GTCGTCGAGG TGGGCTCCGC GGTTGACCGC ATCCGCCCCG GTGACCTCGT CGCCACGGGT
GGGGCCGGGC GCGCCAACCA CGCCGAGTTC CAGGCCGTTC CCGGGTTGCT CTGCGCCCGG
GTGCCGGGCG GGGTCGACCC GGGGGCGGCG GCGTTCGCCA CGATCGGCTC TATCGCCCTG
CACGGGCTGC GCCTGGCGGA GGTGGGCCCC GGGGCGAAGG TGGTGGTCGT CGGGCTGGGG
CTGGTCGGTC AGCTCGCAGC CCGGCTCGCG CTCGCCAGCG GATGTGACGT CGCCGGCATC
GACCTTGCCG ATCTGCCGCT GGTCACCGCC GAGGCGAGCG GTGTCCGTGC GCTGCGGGAG
TCCGGCGAGG CCACCACCGC CGCGGTCCGC GCATGGAGCC GGGGCCGTGG TGCCGACGCG
GTCCTCATCT GCGCCGCTGG TCGCTCGGCG GAACCGGTCA TGCGGGCCAC CGCGCTGGCC
CGGGACCGGG CGCAGTTGGT CGTGGTGGGT GACGTCGGAC TGGGCCTGCT TCGCGCGCCG
TTCTACGACA AGGAGCTGAC GCTGCGCTTC GCCCGCTCCT ACGGACCGGG CCGGTACGAG
CGTGGCTACG AGGAGTGGGG GGTTGACTAC CCGGCCGGGC AGGTCCGCTG GACCGAGGGA
CGCAACCAGG AGGCCGTGCT CGACCTGCTC GCGGCCGACC GGCTGCGAGT TGATGATCTT
GTCACCCACG CCTTTCCGAT CGACGCGGCG CCGCGTGCCT ACGAGATCGT CGCCACCCGC
AGCGAGCCGT ACCTGGGGAT CCGTTTCGAC TACCCGGCGT CGGCTGCCTC CGAACGGGTC
GGGTCCGAAC GGGTCGGGTC CGAACGGGTC GGGTCCGCGG TGGCCGGGGC TGCACTGGCG
CACAGCGCGG GCCCGACCCG GGACCGGTCG GTCAGCCCGC GGCCGCGGGT GCCCCGCCAG
CGATCCGCCC CAGCGGGACG TCGGGGCAGC CGGGTCGGCT GGATCGGGGC CGGGACGTTC
TCCGGATCGG TTCTGCTGCC CGCCTTCCGG GCGGCCGGGT TTGACCAGTT GGTCACGGTG
GCCTCCGCCG GTGGCCGGTC GGCCAGGGCC TTCGCGGACC GGCACGGGTT CGCCGGGGCG
GTGGCCGGCG CCGACGCCGT GCTGGACGAC GACGACGTCG ACGTGGTCGT CATCGCGACG
CCGCATGCGA CGCATGCCGA CCTCGCCGCC CGGGCCCTGG AACGCGGTCG GCACGTATGG
TGCGAGAAGC CGCTCGCGCT GAGCCTCGAC GAGCTCAACC GGGTGGAGAA GGCGGCGGCG
ACCGGCGGCG GGGTGCTTGT CGTCGGATAC AACCGGCGTT TTTCCCCGGC GGTCACCGCA
GCTCGCGCGG CGCTGGCCGA CCGGGATGGT CCTCTCACGT TGAGCTATCG GATCGCCGCC
GGGCCGGTGC CGGCCGACCA CTGGTACAAC GACCGGGTCC AGGGTGGCCG GCTGCTCGGT
GAGGTCTGCC ATTTCGTCGA CACCTGTGCC GCGCTCGCCG GCAGCGAGGT GGACACGGTG
ACGGCGCTCG CCGGGCGGGA GGCCGAGCTG TTGCTTGCTC CCGATGTGGC GGTCACGCTC
CGGCATGCCG ACGGTTCCCT GTCTGCCATC TCCTACAGTT CCGCCCGTCC CCGCGGAGTG
CGTAAGGAGC ACCTCGAGGC GCTGGCGGGC AGCCGGCACG TCCGCATCGA CGACTACCGC
GAACTGGTGA TCGATGGACG TTCCACCTGG AAGGGGCCGC AGGACAAGGG GCATCACGCC
GCCGCGGCGG CCTTCCTGCG GATGTGCCGC GGCAGCGACA CCGGTGTCAC CGCGGAGCTG
CTCGCCTCGA GCCGGGCGAC CCTCGCGGCC GCTGACGCGC TCGGTGCCGA GGTACCGCGA
AGCCCGGCCC GGCTGGGTTC CTGA
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| Protein sequence | MKQVVQAASG GAVRVVDVPV PVIGPTEVLV ATVATIVSAG TERAVTTLAR SGLLTKARAR
PDLVRKVAEK ARTDGLIPAA RSVRDRLGAD VPLGYSGCGR VVEVGSAVDR IRPGDLVATG
GAGRANHAEF QAVPGLLCAR VPGGVDPGAA AFATIGSIAL HGLRLAEVGP GAKVVVVGLG
LVGQLAARLA LASGCDVAGI DLADLPLVTA EASGVRALRE SGEATTAAVR AWSRGRGADA
VLICAAGRSA EPVMRATALA RDRAQLVVVG DVGLGLLRAP FYDKELTLRF ARSYGPGRYE
RGYEEWGVDY PAGQVRWTEG RNQEAVLDLL AADRLRVDDL VTHAFPIDAA PRAYEIVATR
SEPYLGIRFD YPASAASERV GSERVGSERV GSAVAGAALA HSAGPTRDRS VSPRPRVPRQ
RSAPAGRRGS RVGWIGAGTF SGSVLLPAFR AAGFDQLVTV ASAGGRSARA FADRHGFAGA
VAGADAVLDD DDVDVVVIAT PHATHADLAA RALERGRHVW CEKPLALSLD ELNRVEKAAA
TGGGVLVVGY NRRFSPAVTA ARAALADRDG PLTLSYRIAA GPVPADHWYN DRVQGGRLLG
EVCHFVDTCA ALAGSEVDTV TALAGREAEL LLAPDVAVTL RHADGSLSAI SYSSARPRGV
RKEHLEALAG SRHVRIDDYR ELVIDGRSTW KGPQDKGHHA AAAAFLRMCR GSDTGVTAEL
LASSRATLAA ADALGAEVPR SPARLGS
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