Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1303 |
Symbol | |
ID | 3904352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1558262 |
End bp | 1560121 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878636 |
Product | methyltransferase FkbM |
Protein accession | YP_480409 |
Protein GI | 86740009 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTTCC TCATCACCGG TGGCACCGGT TTCCTCGGAA GCCGGGTGGT CGACCGGGCG CTCGCGGACG GACACCGGGT CGTCGGGCTG GCGCGCAGCG ACGCGGCGGC GACGAAGCTG CGCCGACACG GCGCGGGGAC TGTGCGCGGT GACCTCGACG ATCCGGCGAC GTTGCTCCCG GCGTTCCGCG AGGCGAACTG CGAGGCGCTG ATCAACATCG CCTCACTCGG GTTCGGCCAT GCGGAGACGA TCGTGACCGC CGCCCGTGCG GCCGGCATTC GCCGGGCCGT CTTCCTTTCC ACCACCGGGA TCTTCACCAC GCTCGATCCA CCCTCGAAGC GGATCCGGGT AGCGGCCGAG GGGACCATCG CGGCGAGCGG GCTGGACTGG ACGATCATCC GACCGACGAT GATCTACGGG GGTCCCGACG ACCGGAACAT GGCCCGGCTG CTGGCGCTGC TCCGGCGCGT TCCGGTGCTG CCGGTCCCCG GCGGGGGGCA TCATCTGCAG CAGCCGGTGC ACGTCGAGGA CCTGGCCCGC ACCGTGCTGC GCGCAACGAC GACCGCGGCG GCGATCGGAC GCGCCTATGA CGTCGCCGGG CCGGAGGCAT TGACGTTCCG GCAGGTCGTG ATCACGGCCG GCGCCGCCGT CGGCCGGCGG GTGATCTGCG TGCCCGTGCC GGTCCGCCCC GTCATCGCCG TGACCCGCGC CTACGAGCGG CGGGTGTCCT CGCCAAGGTT GAAGGCCGAA CAGATCGCCC GGCTCATCGA GGACAAGGCG TTCGCGATCG ACGCGGCCCG CCGCGACCTG GACCATCGTC CGCGGCCGTT CGCGGCCGGT ATCGCGGCGC AGGCCACCTC ATCACCCTAT CGGGTGACCC CAAGCCGCTC TCCCGACCGA ACGGAGACCC GGATGTTCCG GATCGACCAG GCCACCCAGC TGCTCCAGGA CCTCCAACGG ATCGCCAGGG TGGCTGGTCC CCCGACGGCG CTGCGCTTCG GTGCCGCCGT GGCCCGGCAT GCTCCGACCA TCCGCCGGGC GGGCAACCTG GATGCCGCCG ACCGGGCGAT GGCCACCGGC GGCCACACCT ACCGGCCGCT GCCCGGGGTG ACGGTCATGT TGCCCGGCAC CGCGTTCGGC GGCGCGCGCG AGATGTACTG CCGCGGGGTC TACCACGCCC TCCCCGGGTA CGCGCCGGCG GCCGGCGAGG TCGTCGTCGA CCTCGGCGCA AACCAGGGCC TGTTCTCGGT GCTCGCGGCG CGAGCGGGCG CCGATGTGAT TGCCGTCGAG GCGCAGCGCG GGTTCGCCCC CGCCTTCATC AACCATGCCG CCGGCAACGG TGTGTCGAAC CACATCCAGC TGCTCCACGC CCTGGTCGGT CCGACCGCCG GCGTGTTCGC CGATCCGCGG GCCCGCCGGA ACGCGACACA CTGGGACGGG GACGTCGACG TCCTCACCAT GGCAGAGGTG TTCGAGGCTG GCGGGGTCGA CCAGGTCGAC CTCGTCAAGC TGGACATCGA AGGCTCCGAG TTCGCCCTGT TCGACGAGCC TGGATGGCTG GACGCGGTTG GTCGGATCGT GATGGAGGTG CACACCGGGT TCGGCGATCC CCGTACGCTC GACGACCTGC TGGTCCGGCA CGGCTTCGAG GTCACTCTGC TCGGTAACGA CCTGGTGCCG ACTGCCCATC TGGGCGACGC GGCGTCGGGC TACCTCTACG CCCGCCGGAC CCGATCGACG ACCCGGGCCA TCCGCGGGTC CGCGCAGCCC GACGGTCGCC CGGTGTCGGT ACCCGGCAGC CGCCCGTCAT CCGAGCCCGG TTTCGTCGAC GACCCCGCAC CGCGGGGTGT CTCGGCGTGA
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Protein sequence | MRFLITGGTG FLGSRVVDRA LADGHRVVGL ARSDAAATKL RRHGAGTVRG DLDDPATLLP AFREANCEAL INIASLGFGH AETIVTAARA AGIRRAVFLS TTGIFTTLDP PSKRIRVAAE GTIAASGLDW TIIRPTMIYG GPDDRNMARL LALLRRVPVL PVPGGGHHLQ QPVHVEDLAR TVLRATTTAA AIGRAYDVAG PEALTFRQVV ITAGAAVGRR VICVPVPVRP VIAVTRAYER RVSSPRLKAE QIARLIEDKA FAIDAARRDL DHRPRPFAAG IAAQATSSPY RVTPSRSPDR TETRMFRIDQ ATQLLQDLQR IARVAGPPTA LRFGAAVARH APTIRRAGNL DAADRAMATG GHTYRPLPGV TVMLPGTAFG GAREMYCRGV YHALPGYAPA AGEVVVDLGA NQGLFSVLAA RAGADVIAVE AQRGFAPAFI NHAAGNGVSN HIQLLHALVG PTAGVFADPR ARRNATHWDG DVDVLTMAEV FEAGGVDQVD LVKLDIEGSE FALFDEPGWL DAVGRIVMEV HTGFGDPRTL DDLLVRHGFE VTLLGNDLVP TAHLGDAASG YLYARRTRST TRAIRGSAQP DGRPVSVPGS RPSSEPGFVD DPAPRGVSA
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