Gene Francci3_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1298 
Symbol 
ID3904347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1552237 
End bp1553241 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID637878631 
Productglycosyltransferases-like 
Protein accessionYP_480404 
Protein GI86740004 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACCA CGGCGGTCAT CGTCCACTGG GGGCCGACCG GGCCGACGAT GGATCTGGCC 
GCGCAGCTGG CGGCGATGCC TCAGATCAGC GAGGTCGTCG TGGTGGCGAA CGACCTGCGA
GGACGACCCG ACGGCCTCGG GGAAGAGACG GCCTGGCTCG TCCCCCCCGG CAACCTCGGT
TTCGGCGGCG GCTTCCGGCA CGCGTGTGAC GCCTATCCGG CCACCGACTG CTATCTCCTG
CTCAACAATG ACGTCCAGCT CGTGCCGGCC ACCGTCGACG CCTGTCTGGA ACTACTGTCC
CGCCCGGGCG TGGGCATCGT CGGACCCACT CTGGTCAACG CCGACGGTCT GCATCCGGGC
TTCGCCGGGC TCACCCGCGT CTTCACCGTG CCGCGCGCCC GCCGGACCCC CACGGACCAC
GCCGATGACG TGCCGTGGGT CACCGGCGCG ATCACCTTTG TCAAGGCCGA GTGTCATCGG
CAGGTGCCGA TGGCCGTTCG GTACTTCCTG TACTACGAGG ACGTGGATCT CTGCCAGCGC
GCTCGGGCGG CCGGGTGGCG TGTCCTCGTC AGTCCGGCCC AGGCCTGGCA CACCGGTGGG
GGGACGGTAC CCGGCAACGG CTACACCTAC TACACGGTGC GCAACCGGCT GTGGTTCGCC
CGCATCCACG GCCGCCCGCG GCAGGTGGCG CTGGTGACCG CCTGGCTGCT CCTGGCGGTG
CTGCCCCGGG TCGCCGTGTC CGAGCTGGTG CGCCGGCGCG GAATCGTCCG CGTCCACTGC
GGCCTGCGCG GCGTCGTGGA CGGTCTCGCC CGCATCCCCG ACATCGACCA GACCCTGCCC
GGGGAACCCC GGGCGTCCCG GTGGAGTACG TGGACACGCG AGGCCCGCTC CGTCCCGCGT
CCTCGCCCGG CCCAGGACCG GCCGATCGGT CCGTCGGACC CCGCGGGGGG AGTCGACCGG
CGGGAGAAGG CTGCCGGCAC GGGGGAGCTC ACCCGTCCCG GCTGA
 
Protein sequence
MRTTAVIVHW GPTGPTMDLA AQLAAMPQIS EVVVVANDLR GRPDGLGEET AWLVPPGNLG 
FGGGFRHACD AYPATDCYLL LNNDVQLVPA TVDACLELLS RPGVGIVGPT LVNADGLHPG
FAGLTRVFTV PRARRTPTDH ADDVPWVTGA ITFVKAECHR QVPMAVRYFL YYEDVDLCQR
ARAAGWRVLV SPAQAWHTGG GTVPGNGYTY YTVRNRLWFA RIHGRPRQVA LVTAWLLLAV
LPRVAVSELV RRRGIVRVHC GLRGVVDGLA RIPDIDQTLP GEPRASRWST WTREARSVPR
PRPAQDRPIG PSDPAGGVDR REKAAGTGEL TRPG