Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1265 |
Symbol | |
ID | 3906111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1511373 |
End bp | 1512512 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637878599 |
Product | chaperone DnaJ |
Protein accession | YP_480372 |
Protein GI | 86739972 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0905779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGG ATTATTACGC CGTTCTGGGC GTACGCCGGG AAGCGTCGAA CGACGAGATC AAGCGGGCCT ACCGCAAACT GGCCCGTGAG CTGCATCCGG ATGTCAATCC AGATCCGGAT GCACAGCAGC GCTTCCGGGG CGTCACGGCC GCGTACGAGG TGCTCTCCGA CCCGGAGAAG CGCCAGATCG TCGACCTGGG CGGCGATCCG CTCGCGCCCG GTGGCAGCGG CGGTGGCGGT TCGCCGTTCG GCGCCGGTTT CGGCGGCCTC GGTGACATCA TGGACGCCTT CTTCGGCGGC GGGTCGAGCC GTGGGCCCCG GTCCCGGGTC CGGCGCGGCA ACGACGCGCT GCTGCGCATC GAGCTCGACC TGTCCGAGAC CGCGTTCGGC GCCACGCGCG AGATCACCGT GGACACGGCG GCGGTGTGCT CGACGTGTAC CGGTGCCGGT GCGGCTCCCG GCACGCACCC GTCGACCTGC GGCACCTGCG GCGGGCGGGG CGAGGTCCAG CAGGTCACCC GTTCCTTCCT CGGCCAGATG GTGACCTCCC GGCCCTGTCC GCGGTGTTCG GGTACCGGCA CCGTGATCGA GCATCCCTGC CGGGACTGCG GCGGCGACGG CAGGGTGCGC AAGCGCCGGA CGCTCACTGT GAAGATCCCC TCCGGGGTCG AGGACGGCAT GCGCATCCGG CTGTCGGGCG AGGGCGAGGT CGGGCCCGGC GGTGGGCCGC CCGGTGACCT TTACGTCGAG GTCTCCGAGA AGCAGCACCC GGTTTTCACC CGGGAGGGCG ACGATCTGCA CTGTGAGCTG CCGCTGCCGA TGACCTCGGC GGCGCTCGGC ACCTCCGCCA CGCTGGAGAC CCTCGACGGC ACCGAGACCA TCGCCGTGAA GCCCGGCACC CAGCCCGGTG AGGTCATCAA GCTCGCCGGC CGCGGGGTTC CGCATCTGCG GGCCGCCGGG CGCGGTCATC TGCACATCCA CATCAACGTC GAGACTCCGA CGAAGCTGGA CGGCGAGCAG GAGCGGCTGC TACGAGAGCT GGCGAAGCTG CGCGACGAGG AGGCACCGGC CGTCGTGGGC GGATCCGCCG GCGGCGCGGC GGGGCTATTC CGGCGGCGGG GCACGCGCCG CGGCCGTTAG
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Protein sequence | MAVDYYAVLG VRREASNDEI KRAYRKLARE LHPDVNPDPD AQQRFRGVTA AYEVLSDPEK RQIVDLGGDP LAPGGSGGGG SPFGAGFGGL GDIMDAFFGG GSSRGPRSRV RRGNDALLRI ELDLSETAFG ATREITVDTA AVCSTCTGAG AAPGTHPSTC GTCGGRGEVQ QVTRSFLGQM VTSRPCPRCS GTGTVIEHPC RDCGGDGRVR KRRTLTVKIP SGVEDGMRIR LSGEGEVGPG GGPPGDLYVE VSEKQHPVFT REGDDLHCEL PLPMTSAALG TSATLETLDG TETIAVKPGT QPGEVIKLAG RGVPHLRAAG RGHLHIHINV ETPTKLDGEQ ERLLRELAKL RDEEAPAVVG GSAGGAAGLF RRRGTRRGR
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