Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1240 |
Symbol | |
ID | 3903539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1484570 |
End bp | 1485682 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637878574 |
Product | Poly(3-hydroxybutyrate) depolymerase-like |
Protein accession | YP_480347 |
Protein GI | 86739947 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.194401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTGCGG TGTCCCGGAA ACCGCCGCCA GCACGTTGGC ATCTCGCCGT GCCGGGTGTC GTCGCGCTGA CACTGGTCAT TGTCGTCCAG CTGGTGCACG GTTTCGCGGG CTCGTCCGGC GTCTCCGGCA GCGTCTCTGA CAAGGCAGTG CCGCGACGTT TCGCTGCCGG CTCGGGAATA TCGACCGCGG GCTCCTCCTG CGTCTCACCG CGGCCGGCGG TCCCGCTGCT CTCGGGGGCA CATTCCCTGG TTCTGGGTGG AGTCCGTCGC TACTACCGGT TGACACTGCC GGTGGGTCAC GACGGGCGTC ACGCCTATCC GTTGATCTTC GACTTCCACG GTTTCAAGGC CGATAAGGAG TTGGAAGAGC AGCGTTCCCG CATGGGCGCC CTGGGCAGCG ACCGCGGTTT CATCGTGGTG ACCCCGGACG CGTTGGGGAC ACCACGACGC TGGAACACCC TCGGGGAGCC GGGTAAGGCG GATGACTTTG GTTTCGTGAA TGCTCTGCTG GATGATCTGG ATGCGCGGTT CTGCCTGGAC GACCGTGCTG TCTACGCCGC CGGGCATTCC AACGGTGCCG AGTTCGCCGC CGCGCTGGTG TGCAGATCCG GTCGATTCGC GGCCGTGGCG ATGGTCTCCT CGACGTTCGA GGTCCGCTGC CCGCCCGGAC GTACCCCGGC GACCATGGCC GTGCACGGCA CCGCCGATCC GTCCGTGCCC TATGCGGGTG GCGCGGTGGC GGGCGGACCC GCGCACATCT CGCCGGCTCC GGCGGTGATC CGCGCATACG CCGACCGTTA CGGCTGCAAT CCGACGCCGG TGCTGACCGA GCCCAGAGGC GAAGTGATCA TCCTGCGGTA CGTCGACTGC CTCGGGGGTG CCGAGGTTCG GCTCGACACG GTGACCGGGG GCACGCATCT GTGGCCGGCC AGCCCGGAGG CCCGCCGGGA CCGGTCCGAC TCGGCCGCCG GCCGGTCCTT CGACGCCACC GGCGCGATCC TGGACTTCTT CACCGTGCAC CACATGGATC ATTCACCCGT CATGCCGCCG CGGGTAGCCC TGGTGAGCAA CTCGCCCCGC CGTGGGCCGG ACCTTCGTAG GCTGGCGGGG TGA
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Protein sequence | MGAVSRKPPP ARWHLAVPGV VALTLVIVVQ LVHGFAGSSG VSGSVSDKAV PRRFAAGSGI STAGSSCVSP RPAVPLLSGA HSLVLGGVRR YYRLTLPVGH DGRHAYPLIF DFHGFKADKE LEEQRSRMGA LGSDRGFIVV TPDALGTPRR WNTLGEPGKA DDFGFVNALL DDLDARFCLD DRAVYAAGHS NGAEFAAALV CRSGRFAAVA MVSSTFEVRC PPGRTPATMA VHGTADPSVP YAGGAVAGGP AHISPAPAVI RAYADRYGCN PTPVLTEPRG EVIILRYVDC LGGAEVRLDT VTGGTHLWPA SPEARRDRSD SAAGRSFDAT GAILDFFTVH HMDHSPVMPP RVALVSNSPR RGPDLRRLAG
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