| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1136 |
|---|
| Symbol | |
|---|
| ID | 3906615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 1352556 |
|---|
| End bp | 1353404 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637878467 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_480244 |
|---|
| Protein GI | 86739844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.113401 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTCCG TCCGTCGTCC GTTACCCCAG ACCCCGCCGG GACTCTGGGA GCGACCCGAG
ATGGCCGACG CACTCGCCCG CCGCGACATC GGCACCGTCT TCAAGATCTA CCGCCAGTGG
ACCGGCGCCA CCCAGACGCA GATAGCCGCC GTGTGCGGCC TGCCGCAGTC CCACGTCAGC
GACATCATGA ACGGCCGCCG CCAGGTCACG AGCCTGGAGA TCTTCGAGCG CATCGCCGAC
GGCATCGGCA TCCCCCGCGG ACGCATCGGG CTTGCCGAAA GACCGGGCGC CGTCCCCGAG
CCCCGGACCG AGCCCGGGTC GCCGGCCGCG GACGTGCCGA GCGATGTCGT GCGCGTCTAC
CCCAGCCGCG CCGCCGTTCC CGCCGAGCTG TGGCGGACGC TGTTCGCCGG TGCGCGTCAC
CAGGTCGACG TCCTCGTCAT CGCTGGCCTG TTCCTCCCCG ACGGGCACGC CGACTTCACC
GCCGTTCTCC GCCGCAAAGG CGCCGAAGGC GTGAACATCC GCTACGCCCT GGGGGACCCG
GACTCCCCCG CCGTCGCCCT GCGAGGCGAC GAGGAGGGCA TCGGTGACGG ACTCGCCGCC
CGAACCCGGA TCACCCTCAC CTACCTGGCA TCGTTGCGCG ACGCGCCCGG AATCGAGCTG
CGGCTACACG CCACCACGCT CTACAACTCC ATCTACCGTT TCGACGGCGA CATGCTGGTG
AACACCCACG TCTACGGCGC CCCCGCCGCG CACTCCCCCG TCATGCACCT ACGCGCCCAG
CCCGGCGGAC TCTTCGACCA CTACGCCGCC AGCTTCGAAC GCATCTGGGC CACCACCGAA
GGAGCCTGA
|
|---|
| Protein sequence | MVSVRRPLPQ TPPGLWERPE MADALARRDI GTVFKIYRQW TGATQTQIAA VCGLPQSHVS
DIMNGRRQVT SLEIFERIAD GIGIPRGRIG LAERPGAVPE PRTEPGSPAA DVPSDVVRVY
PSRAAVPAEL WRTLFAGARH QVDVLVIAGL FLPDGHADFT AVLRRKGAEG VNIRYALGDP
DSPAVALRGD EEGIGDGLAA RTRITLTYLA SLRDAPGIEL RLHATTLYNS IYRFDGDMLV
NTHVYGAPAA HSPVMHLRAQ PGGLFDHYAA SFERIWATTE GA
|
|---|
| |