Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1053 |
Symbol | |
ID | 3905299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1251776 |
End bp | 1252777 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637878387 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_480164 |
Protein GI | 86739764 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.599891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTCGCG CGCTGATTAC CGGGATTACC GGTCAGGACG GGTTGTATCT GGGTGAGTTG CTGACCGCGA AGGGTTATGA GGTGTTCGGG TTGGTGCGGG GGCAGTCGAA CCCGAAGGTG GCGACGGTGG AGCGGCTGGT GCCGGGGGTG GTGTTGTTGG AGGGGGATCT GACGGATCTT CCGTCGTTGA TCGGGGCGGT GGAGATCTCG CAGCCGGACG AGGTGTACAA CCTGGGGGCG ATCTCGTTCG TGGGGTTGTC GTGGAAGCAG GCGGAGCTGA CCGGGGAGAC GACGGGGATG GGGGTGCTGC GGGTTCTGGA GGCGTTGCGG ATCGCGGGTG GTAACGACAT GTCGGGGGTG CGGTTCTATC AGGCGTCGTC GTCGGAGATG TTCGGGAAGG TGCGGGAGAC GCCGCAGCGG GAGTCGACGC CGTTTCATCC GCGGTCGCCG TACGGGGTGG CGAAGACGTT TGGTCACTAT CTGACGGTGA ATTATCGGGA GTCGTACGGG GCGTTCGCGT GTTCGGGGTT GTTGTTTAAT CACGAGTCGC CGCGGCGGGG GATCGAGTTC GTGACCCGGA AGATCTCGCG GGCGGTGGCG CGGATTTCGT TGGGGTTGCA GGACTCGTTG TCGTTGGGGA ATCTGGAGTC GCGGCGGGAC TGGGGTTTCG CGGGGGATTA CGTGGAGGCG ATGTGGCGGA TGCTGCAGCA GGACGCGCCG GACGATTATG TGGTGGCGAC CGGGGAGACG CACAGTATCC GGGAGTTGTT GGATGTGGCG TTCGGGCGGG TGGGGATCTC GGACTGGTCG GGGTTCGTGC GGCAGGATCC CCGGTTTTTC CGGCCGGCTG AGGTGGATGT GCTGGTGGGG GATTCGTCGA AGGCGCGGGA GGTGTTGGGG TGGAAGCCGC GGGTGGGGTT CGAGGAGTTG GTGGCGATGA TGGTGGACGC CGACGTCGCC ACCGAGACGG AATCGGCCGA CAAGGCACTG ACAATCCGTT GA
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Protein sequence | MPRALITGIT GQDGLYLGEL LTAKGYEVFG LVRGQSNPKV ATVERLVPGV VLLEGDLTDL PSLIGAVEIS QPDEVYNLGA ISFVGLSWKQ AELTGETTGM GVLRVLEALR IAGGNDMSGV RFYQASSSEM FGKVRETPQR ESTPFHPRSP YGVAKTFGHY LTVNYRESYG AFACSGLLFN HESPRRGIEF VTRKISRAVA RISLGLQDSL SLGNLESRRD WGFAGDYVEA MWRMLQQDAP DDYVVATGET HSIRELLDVA FGRVGISDWS GFVRQDPRFF RPAEVDVLVG DSSKAREVLG WKPRVGFEEL VAMMVDADVA TETESADKAL TIR
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