Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0961 |
Symbol | |
ID | 3903868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1133945 |
End bp | 1134694 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637878295 |
Product | transposase, IS4 |
Protein accession | YP_480074 |
Protein GI | 86739674 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0578745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTGCG CTTCCGCTCG TTCCTGGGCC TCGACATTGC TGGCCGACGA CCGCGCTCAG CGCCAGACGT GGCGCAAGCT GTCCCCACAC GGGCAGGCAC TCCTCGTGCT CGCGCACCTA CGCAACGGCG ACACCTACGA GCGACTCGCC GAAGGCTTCG GCGTCAGTGT CGGGACGGTC TACAACTACG TGCGCGAGGC CGTCGATCTG CTGGCCACCC GCGGCCGTAG CCGCCTCGCG GCGGTGTGGA CGTTCGCGTG GACGCAGAGC AACTTCCTCA TCCTCGACGG AACGGTCGTG CGCACCACCC GTGTCCGGGC ACACAACAAG CTGTACTACT CGGGCAAGCA CAAGTACCAC GGCATCAACC TCCAGGGCCT CACCGACCCC TACGGCAGGA TGATCTGGAT CTCCGAGGGG CTTCCCGGCA GCGTCCACGA CCTCACCGCC GCCCGCATGC ACGACATCCT CCACGTGATC GACCGCTCGG AGCTCCACCT CTTCGCCGAC AAGGGATATG TCGGCGGCGA AGGAGACCAC CTCCTCGTTC CGTACAAGAA GCCACCCGGC GGCGACCTGT CCGATCAGCT AAAGGAGATC AACCGTGCCC ACGCCGCCAC CCGCGCCAGA GGCGAGCGCG GCTTCGCGAT CCTGAAGAAC TGGCACATCT TCGACCGCTT CCGCGGCTGT CCCCGCCGTG TCGGGAAGTT CGCCCTCGCC GCATTCATTC TCACCGAGGA AGAGATTTAG
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Protein sequence | MACASARSWA STLLADDRAQ RQTWRKLSPH GQALLVLAHL RNGDTYERLA EGFGVSVGTV YNYVREAVDL LATRGRSRLA AVWTFAWTQS NFLILDGTVV RTTRVRAHNK LYYSGKHKYH GINLQGLTDP YGRMIWISEG LPGSVHDLTA ARMHDILHVI DRSELHLFAD KGYVGGEGDH LLVPYKKPPG GDLSDQLKEI NRAHAATRAR GERGFAILKN WHIFDRFRGC PRRVGKFALA AFILTEEEI
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