Gene Francci3_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0846 
Symbol 
ID3904328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp987910 
End bp988860 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content74% 
IMG OID637878179 
ProducttRNA/rRNA methyltransferase 
Protein accessionYP_479959 
Protein GI86739559 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGGTG ACGTGAGCAG GTGTGCGGGG TCGGCTGGCG GGCCGGTCGG CGTGACGGTC 
GGCGTGACGG TCGTGGCCAC CCCACCAGTC ATCATGATCG ACGATTCGGG TGATCCCCGG
GTCGACGACT ACATCTCGTT GACCGACGTC GCGCTGCGCC GTCGGCGGGA GCCGGCCGAC
GGGCTGTTCA TCGCCGAGGG TGAACGAGTG ATAACCAGGG CGCTGCGGGC CGGCTACCGG
CCGCGCTCGG TCCTGGTCTC GCCGGCGCGC CTGGCGGCCG TGCCCGCGGA CCTCGGCGTT
GACGTCCCGG TGTACGTCGC GGGACCCGAC GTGCTCGCGG CGATCACCGG CTTCGAGGTG
CATCGGGGGG CGCTTGCGGC GATGGGCCGC CAGCCGCCCC GCGCCGCCGC CGACCTCCTG
GTCGATGCCC GGCGGGTACT GGTGTGTGAG GACATCGTGA GCCACACCAA CCTGGGGGCG
ATTTTCCGTT CGGCCGCGGG ACTCGGGATG GACGCGGTGC TCCTGAGCCC GCGCTGCGCC
GATCCGCTCT ACCGGCGTTC CGTGCGGGTG TCGATGGGGG AGGTGTTCGC CGTCCCCTAC
GCCCGGCTCG AACCCTGGCC GGAGGCCCTT GGTCTGCTGC GGGATGCCGG GTTCACGCTG
CTGGCGCTGA CTCCGGCGGC GGACGCCGAG GATCTTGGCT CCTTCGCGGC CGGACTCACC
CCCCGCGCCG CGCCCGCGCT TGCACCTGCG CCCGCACCTG CGCCCGCACC TGCGCCGGTG
CCGGCGGCGG CCCGGGTCGC GCTGCTGCTG GGCACGGAGG GCGCCGGGCT GTCGGCGGCG
GCACAGGCCG CGGCGACGGC CCGGGTCCGG ATTCCGATGG CGCACGGGGT CGACTCGCTG
AACGTCGCGG CGACCGCCGC CATCGCCTGC TACCTGCTGG GCCGCCGTTG A
 
Protein sequence
MPGDVSRCAG SAGGPVGVTV GVTVVATPPV IMIDDSGDPR VDDYISLTDV ALRRRREPAD 
GLFIAEGERV ITRALRAGYR PRSVLVSPAR LAAVPADLGV DVPVYVAGPD VLAAITGFEV
HRGALAAMGR QPPRAAADLL VDARRVLVCE DIVSHTNLGA IFRSAAGLGM DAVLLSPRCA
DPLYRRSVRV SMGEVFAVPY ARLEPWPEAL GLLRDAGFTL LALTPAADAE DLGSFAAGLT
PRAAPALAPA PAPAPAPAPV PAAARVALLL GTEGAGLSAA AQAAATARVR IPMAHGVDSL
NVAATAAIAC YLLGRR