| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0829 |
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| Symbol | |
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| ID | 3905106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 967427 |
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| End bp | 969034 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637878162 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_479942 |
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| Protein GI | 86739542 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR03469] hopene-associated glycosyltransferase HpnB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.759846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCGC GGCAGGAGAG TTTCGGGGGG GAGATCTCCA TACCGGCTCG GCCAGACCGG
GACGGAAGCC TTGTAACCCC GCATTACCCG GGGCGCCCGC ACGCCCTTGA GGGGCCCGTG
GCAGTATCAC TTTCTGTGAC AGTGCTGCTG TGGGTCGCCG TTGCCTCTCT GCTCGCCTGG
CTCTACCTGA CCGTCGGCCA TGGGTTCTTC TGGCGGACCG ATCAGCGCCT GCCATCCCGG
CAGGCGCCGA CCGCTTGGCC CAGTGTGGCG ATCGTCGTGC CGGCTCGGGA CGAGGCCGAC
GTGCTTCCCG TGACGCTTCC GACGCTGCTT GCCCAGGACT ATCCCGGTCC TGTCCAGCTG
ATCCTGGTGG ACGACGGTTC CACCGACGGG ACCACGGAGG TTGCCCGGGA CCTGGCGGAA
CAGGCCGCCA CGCGTGGTGA GACCAACGTG ACGCCGGCCA TGACCACATC CACCGAACCC
CCCACTGGCT GGACCGGGAA GCTGTGGGCG CTGCGGCGGG GCATCGAGTG CGCTGGCGAC
GTCGACTTCC TGCTCCTCAC CGACGCGGAC ATCTCCCACC GCCCGGGATC GCTGACCGCG
CTCGTCGAGT CGGCGACCTC CCAGAAGCTG GACATGGTGT CGCAGATGGC CGTGCTACGG
GTGCAGACCG GCTGGGAGCG TCTGATCGTC CCGGCCTTCG TGCACTTCTT CGCGATGCTG
TACCCGTTCC GGTGGTCGAA CCGGCCGGGT TCGCGGGTGG CCGCCGCGGC CGGCGGATGC
TCCCTGATCC GCCGGGAGGC CCTTGCGGCG GCCGGTGGAC TGGCGGAGGT GCGCGGCGCC
GTCATCGACG ACGTGGCGAT CGCGCGGATC ATCAAGCGCT CGGGCGGGCG GACGTGGCTC
GGACTCGCCG AGCAGGTCCA CAGCCAGCGC CCGTATCCGC GGCTCGCGGA TCTGTGGAAG
ATGGTGTCCC GCAGCGCCTA TGCGCAGTTG CGGCACTCCC CGTCGCTGCT GGTCGGGACC
GTGTTGGGAC TGAGCCTGGT CTTCGTCATC CCAGTGGTCG CGACCATCGT GGGCATCGTG
ACCGGCGACG TCGCCACGGC TCTCGTCGGT GGGATCGCTT GGTTGATCAT GACTGTCACC
TATCTGCCGA TGACCCGCTA CTATTGTCAG CCGCTGCCGC TGGCCCTGCT GCTCCCCGGA
GTGGCCGTGC TGTACCTCGC GATGACGGTG GACTCGGCGC GGCTCAAGCG GGCCGGGCGG
GGAGCGGCCT GGAAGGGACG TACCTACCAG GATCACGGTG CCCCGGCCGC CGCCCCCGAG
TATCCGAACG GCCCGGGTGA ACGGCGTGAG GGTTCGGTGG CCGGGCCGCC CGACTCCGGC
GGCTCATCGG CCTCCGCCGG CGGCTCATCG GCTTTGCCAT CCGCCTCGTC CACGGTGCCC
GCAACACCCC TGGTAATGGC GACATCCTCG GCGGTCCCCG CGCCGGCCGT GGCGCCGGCT
TCCCCCACGC CTACGTCCAT ACCGACGCCC ACTCCCACGC GGTGGCCCGC ATCGTCATCG
GCCTCGCCGC CGGTCCGGGG CGGATCGACC GATCAGCCCC GGACCTAG
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| Protein sequence | MVARQESFGG EISIPARPDR DGSLVTPHYP GRPHALEGPV AVSLSVTVLL WVAVASLLAW
LYLTVGHGFF WRTDQRLPSR QAPTAWPSVA IVVPARDEAD VLPVTLPTLL AQDYPGPVQL
ILVDDGSTDG TTEVARDLAE QAATRGETNV TPAMTTSTEP PTGWTGKLWA LRRGIECAGD
VDFLLLTDAD ISHRPGSLTA LVESATSQKL DMVSQMAVLR VQTGWERLIV PAFVHFFAML
YPFRWSNRPG SRVAAAAGGC SLIRREALAA AGGLAEVRGA VIDDVAIARI IKRSGGRTWL
GLAEQVHSQR PYPRLADLWK MVSRSAYAQL RHSPSLLVGT VLGLSLVFVI PVVATIVGIV
TGDVATALVG GIAWLIMTVT YLPMTRYYCQ PLPLALLLPG VAVLYLAMTV DSARLKRAGR
GAAWKGRTYQ DHGAPAAAPE YPNGPGERRE GSVAGPPDSG GSSASAGGSS ALPSASSTVP
ATPLVMATSS AVPAPAVAPA SPTPTSIPTP TPTRWPASSS ASPPVRGGST DQPRT
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