| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0779 |
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| Symbol | |
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| ID | 3905808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 907389 |
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| End bp | 908696 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878112 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_479892 |
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| Protein GI | 86739492 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTGG CACGCGGCAG TTGGCTGGAC GCGACATCGT TCGTGGAGGA CGAGGTCAGA
GAGCTTGTCC GGCGGCGTTC TCTCGATCCC GTGCGGGACC CGGCGCAGGT GCGTCAGCTC
GTTCACGAGG TGCTCGCCGA CTATGAGGAA CGGGCTCTCG TCAGCGACCT TCCCCCGGTC
GTCGACCGGG ACGTCACCGC CCGGCTGGTC TATGACGCGG TTGCCGGGTT CGGGCCGCTG
CAACGCCACC TCGACGACCC GACTGTGGAG GAGGTCTGGA TCAACGAGCC GGGCCGGGTA
TTCGTCGCCC GGGCCGGTCG CAGCGAGCTG ACGACGACCA TTCTGACCGC CGATCAGGTC
CAGGACCTCG TCGAGCGGAT GCTGAAGTCC TCGGGCCGGC GGGTGGACCT CTCGACCCCG
TTCGTCGACG CCATGCTTCC GGATGGTTCC CGGCTGCACG TGGTCATCCC CGATGTCACC
CGGGTGCACT GGTCGATCAA CATCCGTAAG TTTGTGCTGT CCGCGTCGAG CCTGGACGAA
CTGGTCGGTC TTGGGACGAT CACGCTGGCA GCGGCCGCCT TTCTGGACGC CGCGGTCGTC
GCCGGCCTCA ACATCATCGT TGCGGGCGGC ACCCAGGCCG GCAAGACGAC CATGCTCAAC
TGTCTCGGCT CGGCCATCCC GGCCCGGGAA CGGGTGATCA GCTGCGAGGA GGTGTTCGAG
CTGAAGCTGC GGGCCGCCGA CTGGGTGGCG ATGCAGACCC GGCAGGCCAA CCTGGAGGGC
AGCGGGGAAA TCCGGCTGCG CCGGCTGGTC AAGGAGGCCC TGCGGATGCG CCCGGACCGG
CTCCTGGTCG GCGAGGTTCG CCAAGAGGAG GCGCTCGACC TGCTGATCGC GCTCAACTCC
GGGCTGCCCG GTATGTGCAG CCTGCACGCG AACTCGGCTC GCGAGGCCGT GACGAAGCTG
TGCACCCTGC CCCTGCTCGC CGGCGAGAAC GTCAGCCATG CCTTCGTGGT GCCCACCGTC
GCCGCCAGCG TGGACCTCGT CGTCCATCTG GAGAAGGACG TCTCGGGCCG GCGCCGCGTC
ACCGAGGTCG TCGCGCTGCC CGGCCGGACG GAGGGGGATG TCATCGAGAT TGCCCAGATC
TACCGCTCGC GCGCGGACGG ACTGGTCCGC GCCGACGGCT TCCCGCCACA TCCCGAACGG
TTCGCCCGCG CCGGCTACGA CCTGCCCGCC CTGCTGGCCC AGAGCGACCA TGATTACCAT
CATCATCGGC CCGGCGGGGG CTGGCCCGAG ATCGCCGCGG AGCGCTGA
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| Protein sequence | MAVARGSWLD ATSFVEDEVR ELVRRRSLDP VRDPAQVRQL VHEVLADYEE RALVSDLPPV
VDRDVTARLV YDAVAGFGPL QRHLDDPTVE EVWINEPGRV FVARAGRSEL TTTILTADQV
QDLVERMLKS SGRRVDLSTP FVDAMLPDGS RLHVVIPDVT RVHWSINIRK FVLSASSLDE
LVGLGTITLA AAAFLDAAVV AGLNIIVAGG TQAGKTTMLN CLGSAIPARE RVISCEEVFE
LKLRAADWVA MQTRQANLEG SGEIRLRRLV KEALRMRPDR LLVGEVRQEE ALDLLIALNS
GLPGMCSLHA NSAREAVTKL CTLPLLAGEN VSHAFVVPTV AASVDLVVHL EKDVSGRRRV
TEVVALPGRT EGDVIEIAQI YRSRADGLVR ADGFPPHPER FARAGYDLPA LLAQSDHDYH
HHRPGGGWPE IAAER
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