Gene Francci3_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0626 
Symbol 
ID3903494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp711129 
End bp711602 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID637877959 
Producthypothetical protein 
Protein accessionYP_479739 
Protein GI86739339 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.902087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG TCGAGGTGTC CACGGCGGAG CGCATGCGGG AGTTCGGGGC CTGGTTGGCT 
ACCCTGCTGC GGCCCGGGGA CCTGCTCGTG CTCTCCGGCC CGCTCGGCGC GGGCAAGACG
GTTCTGGCCC AGGGGATCGC GGCCGGGCTG GGCGTGCGGG AAACGGTCAC CTCGCCGACG
TTCGTGCTTG CCCGGATCTA CCCGGACGGG CGGATTCCCC TCGTGCACGT GGACGCCTAC
CGGCTCGGTG GGGTCGTCGA GGTCGACGAT CTCGACCTCG ACGCCGACGT CGACACCTCG
GTCACCGTGG TCGAGTGGGG TGCCGGTCTC GCGGAACGTC TCACGCAGGA TCATCTGGAG
ATCGTGATCT CCCGGCCACG TGCCGACGAG GTCGGGGAGA CTCGGATAGT CCGCCTCGTC
CCGTCCGGGG CCAGCTGGAT CGAACGGCTG CGCGCACGTG CGCCGGTGAG TTGA
 
Protein sequence
MNTVEVSTAE RMREFGAWLA TLLRPGDLLV LSGPLGAGKT VLAQGIAAGL GVRETVTSPT 
FVLARIYPDG RIPLVHVDAY RLGGVVEVDD LDLDADVDTS VTVVEWGAGL AERLTQDHLE
IVISRPRADE VGETRIVRLV PSGASWIERL RARAPVS