Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0598 |
Symbol | rplR |
ID | 3905881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 685719 |
End bp | 686093 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637877931 |
Product | 50S ribosomal protein L18 |
Protein accession | YP_479711 |
Protein GI | 86739311 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGA GCCTCGGCGC CAGCTCGCGT CGACGGACCG CGAAGCTCCG TCGGCACGTC CGGGTGCGCA AGAAGGTGGC GGGCACCCCG TCTCGCCCAC GGCTCGTCGT CACCCGGTCC TCGCGGCACA TCTACGCCCA GGTCATCGAC GACGTCGCCG GCCACACGCT GGCGTCGGCG TCCACCCTGG ACGTGTCGCT GCGCGGCGGC GAGGGGGACA AGACCGAGCA GGCCCGCAAG GTCGGCGCCC TGGTCGCCGA GCGCGCGAAG GCGGCCGGGA TCGCCGCGGT CGTGTTTGAC CGCGGCGGGC GGACCTACTC CGGCCGCATC GCCGCGCTCG CGGACGCGGC GCGGGGGAAC GGGCTGGACT TCTGA
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Protein sequence | MAVSLGASSR RRTAKLRRHV RVRKKVAGTP SRPRLVVTRS SRHIYAQVID DVAGHTLASA STLDVSLRGG EGDKTEQARK VGALVAERAK AAGIAAVVFD RGGRTYSGRI AALADAARGN GLDF
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