Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0551 |
Symbol | |
ID | 3904202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 640054 |
End bp | 641589 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637877880 |
Product | NADH dehydrogenase subunit N |
Protein accession | YP_479664 |
Protein GI | 86739264 |
COG category | [C] Energy production and conversion |
COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.170778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACAC CGCCGTCGAT CGAGTACTCC TCGCTCAGCC CGATCCTGAT CGTGTTCGGG GTCGCGCTCG TCGGGGTGCT CGTCGACGCC TTCGCCACGA AGCGGGCCCG GCGGACCTTC CAACCGATCC TGGCGGGTGC GGGCTTCGTC GCCGCGCTCG TGGCCGTGGC GGTGCTGCAC GGCCGGCAGG CCATCCTCGC CTCCGGTGCG CTGGCGATCG ACGCGCCGAC CTTGTTCATG CAGGGCACGA TCCTGGTCTT CGCCCTGCTG TCGGTGCTGC TGGTGGCCGA ACGCCAGCTT GACTCGTCCG GCGGGGCTAT TGTGGCCTCG GCCGCGATCA CCCCGGGCTC GAAGGGATCG ACGGCGCAGC AGACCTCGGC AGACGTGCAG ACCGAGGCGT ATCCGCTGAT GGTCTTCTCG GTCACCGGGA TGATGCTCTT CGTCGCCTCG AACAACCTGC TAGTGATGTT CGTGGCGCTG GAGATCCTCT CGTTGCCGCT GTACCTGCTG GCCGGGCTCG CCCGGCGCCG TCGGCTGCTG TCGCAGGAAG CGGCGATGAA GTACTTCCTG CTCGGGGCGT TCTCCTCGGC CTTCTTCCTC TACGGCGTCG CGTTCGCCTA CGGATTTGCC GGCAGCGTGG AGCTCGGGGC GGTCGCGGAC GCGGTCAGCA ACGCCGGTGC GAACGACACC TACCTCTATC TGTCGCTCGC GCTGCTGGCG GTGGGGCTGT TCTTCAAGAT CGGCGCCGTG CCGTTCCACT CCTGGACGCC GGACGTCTAC CAGGGCTCGC CGACGCCGGT TACCGCGTTC ATGGCGGCGG GGACGAAGGT CGCCGCGTTC GGTGCCCTGT TGCGGGTCTT CTACGTCGCC TTCGGAGGGC TGCGCTGGGA CTGGCGACCA ATCCTGTGGA CGATCGCCAT CCTCACCATG GTGGTCGGCG CGGTGCTCGC CCTGACCCAG CGTGACATCA AGCGTATGCT GGCCTACTCG GCGATCGCGC ACGCCGGGTT CCTGCTGGTG GGCCTCGCCG GCACCAACAC CGACGGCCTG CGCGGCTCGA TGTTCTACCT GGTGACCTAC GGCTTCACGA CGATCGCCGC CTTCGCCGTG GTCTCCCTGG TCCGTACCGG CGACGGCGAG GCCGGCGACC TGTCCCAGTG GCGGGGGCTC GGCAGGACCT CGCCCCTGCT GGCCGGGACG TTCTCGTTCC TGCTGCTCGC GCTCGCGGGG ATCCCGCTGA CGAGCGGGTT CACCGGGAAG TTCGCGGTGT TCCAGGCCGC GATCGCCGGG GACGCCACCC CGCTGGTAGT CGTTGCACTG GTGTGCAGCG CCATCGCCGC CTTCTTCTAC GTGCGGGTCA TCGTGCTGAT GTTCTTCTCC GAGCCGCTTG CCGAGGGACC GGTGGTGGTG ACCCGCCCGA CGCTGACCTT CGCCGCGGTC GCCATCGGTA CCGTGGCTAC TCTTGTACTG GGAGTAGCGC CACAGCCACT CCTGGACCTC GCGACGACCG CCGCGACGTC CGGCTTCGTA CGCTGA
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Protein sequence | MITPPSIEYS SLSPILIVFG VALVGVLVDA FATKRARRTF QPILAGAGFV AALVAVAVLH GRQAILASGA LAIDAPTLFM QGTILVFALL SVLLVAERQL DSSGGAIVAS AAITPGSKGS TAQQTSADVQ TEAYPLMVFS VTGMMLFVAS NNLLVMFVAL EILSLPLYLL AGLARRRRLL SQEAAMKYFL LGAFSSAFFL YGVAFAYGFA GSVELGAVAD AVSNAGANDT YLYLSLALLA VGLFFKIGAV PFHSWTPDVY QGSPTPVTAF MAAGTKVAAF GALLRVFYVA FGGLRWDWRP ILWTIAILTM VVGAVLALTQ RDIKRMLAYS AIAHAGFLLV GLAGTNTDGL RGSMFYLVTY GFTTIAAFAV VSLVRTGDGE AGDLSQWRGL GRTSPLLAGT FSFLLLALAG IPLTSGFTGK FAVFQAAIAG DATPLVVVAL VCSAIAAFFY VRVIVLMFFS EPLAEGPVVV TRPTLTFAAV AIGTVATLVL GVAPQPLLDL ATTAATSGFV R
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