| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0542 |
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| Symbol | |
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| ID | 3904193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 628412 |
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| End bp | 629200 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637877871 |
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| Product | NADH dehydrogenase subunit E |
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| Protein accession | YP_479655 |
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| Protein GI | 86739255 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.542965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.306616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCT CGCCGGAGAC CCATGCGGCC GCGCAGGAGA TCATCGCCAG GTACCCAGCC
GGCCGATCCC GTTCGGCCCT GCTCCCGCTG CTGCACCTGG TACAGGCCGA GCAGGGATGC
GTGACCGCGC AGGGCGTCGC GTTCTGCGCG GACGTGCTGG GCATCACCCG GGCCGAGGTC
GGCGCGGTGG CGACCTTCTA CACGATGTAC AAGCGGCATC CGGTCGGGGA CTACCTCGTC
TCGGTCTGCA CGAACCTGTC GTGCGCGCTG CTCGGTGGCG AGGACGTCTA CGAGCGGGTC
TCGAAGCTCC TCGGGGTCGG CCATGACGAG ACGACGCCGG ACGGGTCGAT CACCCTCGAG
CACGCCGAGT GCCTCGCGGC CTGCGACTAC GCACCGGTCA TGACGGTGAA CTACGAGTTC
TACGACCAGG TCGACCCCGA CTCCGCCCAG GCGATCGTCG AGGACCTGCG AGCGGGGCGG
CGGCCGGCGC CGACCCGCGG CGGTCCGCTG TGCTCGTTCG CCGAGGTCTC CCGCCAGCTC
GCCGGGTTCG GCGATCCGAG ACCGGAGGGC GTCGCGGGCC CGGGGGTCGG CGAGCCGTCG
GTCGTGGGTC TCCTCGTGGC CGAGGCGGCC GGCTGGAGCG CCGAGCAGGC GCCCGCGCCG
CTGGTCACCC ACGGCGTGGT GGCCGACGCG GCGGCGCCGC GGCCCGCCGC CCCACCGCCT
GCCGGGCCGC CGCCCGCGGT GGTTCCAGCG CCGACGACCC CGGCCTCCTC GGAACGGAAG
GGGAGCTGA
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| Protein sequence | MAFSPETHAA AQEIIARYPA GRSRSALLPL LHLVQAEQGC VTAQGVAFCA DVLGITRAEV
GAVATFYTMY KRHPVGDYLV SVCTNLSCAL LGGEDVYERV SKLLGVGHDE TTPDGSITLE
HAECLAACDY APVMTVNYEF YDQVDPDSAQ AIVEDLRAGR RPAPTRGGPL CSFAEVSRQL
AGFGDPRPEG VAGPGVGEPS VVGLLVAEAA GWSAEQAPAP LVTHGVVADA AAPRPAAPPP
AGPPPAVVPA PTTPASSERK GS
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