Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0431 |
Symbol | |
ID | 3903620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 513784 |
End bp | 514575 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637877763 |
Product | 3-amino-5-hydroxybenoic acid synthesis related |
Protein accession | YP_479547 |
Protein GI | 86739147 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01454] 3-amino-5-hydroxybenoic acid synthesis related protein [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGAACTG AGCTGAAACC CTGGTCGGCC ATGACCACCA CCGGGACCGG TGCGGGGACG ACCATCGGGA CCGGTGCGGC GTCCGGAACA CGGAAACGTG CGGTCATCTT CGATCTCGAC GGGGTGCTGG TCGACAGCTT CGGAGTGATG CGGCAGGCGT TCACGATCGC CTACGCCGAG GTCGTGGGTC CCGGCGAGCC CCCGTTCGAG CAGTACAACC GGCACCTGGG ACGCTACTTC CCGGACATCA TGCGGATTAT GAATTTGCCG CTGGAGATGG AGGAGCCGTT CGTCCGCGAG AGCTATCGGC TGGCCCACCA GGTGGTGCTC TTCGAAGGGG TCGCCGCGCT GCTGCGGAGC CTGCACGAGC GCGGCCTCGG GCTCGCGGTC GCCACCGGCA AGGCGGGTCC ACGGGCCCGG CACCTGCTGG GTGAGCTCGA CATTCTGCCG ATCTTCGATT ATGTCATCGG CTCTGATGAG ATCGCCCGTC CCAAGCCGGC GCCGGACATC GTGAACCGGG CACTTGAGCT GTTGGGCGTG GCGCCGAATG AGGCGATGAT GATCGGGGAC GCGGTCGCCG ACCTGGAGAG CGCGCGTGCG GCCGGCGTGA TGGCGGTGGC CGCGCTGTGG GGCGAGGCGG ACGGCGCCGA GCTGGTCGCG GCCGGGCCGG ACGCGGTGCT GCGCCGGCCC GCGGAGTTGC TGTCCCTTCT CCGGCCGCAC CCGGTCGAAC CCGCCGGCAC CGCCGGTGTC CCCGCGGCTC AGGCCAGCCG GCCGATCCTC GCCGGCGACT GA
|
Protein sequence | MGTELKPWSA MTTTGTGAGT TIGTGAASGT RKRAVIFDLD GVLVDSFGVM RQAFTIAYAE VVGPGEPPFE QYNRHLGRYF PDIMRIMNLP LEMEEPFVRE SYRLAHQVVL FEGVAALLRS LHERGLGLAV ATGKAGPRAR HLLGELDILP IFDYVIGSDE IARPKPAPDI VNRALELLGV APNEAMMIGD AVADLESARA AGVMAVAALW GEADGAELVA AGPDAVLRRP AELLSLLRPH PVEPAGTAGV PAAQASRPIL AGD
|
| |