Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0422 |
Symbol | |
ID | 3903246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 501708 |
End bp | 502997 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637877753 |
Product | ammonium transporter |
Protein accession | YP_479538 |
Protein GI | 86739138 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAT TGAATTCGGG CGATACCGCG TGGATGCTCA TCAGTTCCGC GATCGTGCTG TTCATGACGC CCGGACTGGC GTTCTTCTAC GGTGGCATGG TCCGAGCGAA GAACGTGCTC GGAATGATCA TGCAGAACTT CTTCTGCATC GGGATCGTCA CGCTGATCTG GTCGGTCATC GGGTTCAGCG TCGCGTTCGG CGAGGGTAAC GGCTTCTGGG GCGGATTCGA CTTCTTCGCT CTCCAGGACC TCTCCGGCAG CGACGGCGCG ATCCCGTACG TCGTGTTCGT CGCCTTCCAG CTGATGTTCG CGATCATCAC GCCCGCCCTC ATCACCGGCG CGATCGCCGA TCGCATGAAG TTCAGCGCCT TCGCGATCTT CATCCCGCTC TGGTCGCTGC TGGTCTACTC GCCGATCGCA CACTGGGTGT GGGCGAGCAA GGGCTGGTTG TTCGAGCGCG GCGCGATGGA CTTCGCGGGC GGCACGGTCG TCCACGCCAA CGCCGGTATC GCGGCGATCG TGCTGGCGCT GGTCCTCGGC AAGCGGGCCG GTTGGCCGAC CGGCGACTTC CGCCCCCACA ACGTCCCGTT CGTTCTCCTG GGCACCGGCA TCCTGTGGGT CGGATGGTTC GGGTTCAACG CGGGTTCCGC GCTGGGCGCC AACAAGGTCG CCGGATACGC CCTGCTCAAC ACCCAGATCG CGACCGGCGT CGCGATCCTC GGATGGCTCG CGGTCGAGCA GCTGCGCGAC GGCAAGGCGA CCACCCTGGG AGCCGCCTCC GGCGCGGTCG CGGGTCTGGT GGCCATCACC CCGGCCTGTG GTTTCGTCTC TCCGATGGGT TCGATCGCCA TCGGCGGCAT CGCCGGCGTC GTCTGCGCCC TGGCCACCTC GATCAAGGGC AAGGTCGGCA TCGACGACTC GCTCGACGTC GGTGCGGTCC ACCTGGTCGG CGGTGTGCTC GGAGCCCTGC TGACCGGCCT CTTCGCCACC GTCGACACGA ACGAGGCCGG CAAGGACGGT GTCTTCTACG GCGGCCCGTG GAGCGTCTTC GGGGAACAGG CGCTCGCCGT CGGCGCGACG CTGGGCTACT CGGCCGTCGT GACGGCGATC ATCGCTCTCG CCCTGAAGTA CACCATCGGT CTCCGGCTGA ACGCCGACGA CGAGATCGCC GGCATGGACG AGGCGTTGCA CGGGGAGACG GCGTACCGCT TCACGTCCAT CGGCGGTAGC GGCTCGCTGT CCACGAGCAG CATCAGCCCC GTCAAGGTGC CCGAGGAGGC CCAGGCATGA
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Protein sequence | MDKLNSGDTA WMLISSAIVL FMTPGLAFFY GGMVRAKNVL GMIMQNFFCI GIVTLIWSVI GFSVAFGEGN GFWGGFDFFA LQDLSGSDGA IPYVVFVAFQ LMFAIITPAL ITGAIADRMK FSAFAIFIPL WSLLVYSPIA HWVWASKGWL FERGAMDFAG GTVVHANAGI AAIVLALVLG KRAGWPTGDF RPHNVPFVLL GTGILWVGWF GFNAGSALGA NKVAGYALLN TQIATGVAIL GWLAVEQLRD GKATTLGAAS GAVAGLVAIT PACGFVSPMG SIAIGGIAGV VCALATSIKG KVGIDDSLDV GAVHLVGGVL GALLTGLFAT VDTNEAGKDG VFYGGPWSVF GEQALAVGAT LGYSAVVTAI IALALKYTIG LRLNADDEIA GMDEALHGET AYRFTSIGGS GSLSTSSISP VKVPEEAQA
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