Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0379 |
Symbol | |
ID | 3903430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 448713 |
End bp | 450674 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637877708 |
Product | ABC transporter related |
Protein accession | YP_479495 |
Protein GI | 86739095 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC CGGTACCGGC ACCGCGCCGC GGCCCGGCCC CGACGGCCGG GCCCGCTCGG TTCTTCGTGG GCCCGGGCGC GACGGAGAAG TCGATGGACT TCGCCGCGTC GAGCCGCCGG CTGCTCGGAC TGCTGCGACC GCAGCGCCAC CTGCTGATCG CCGTCGTGGT CCTGGCGACG TTGAGCGTCG GCCTGAGCGT GATCGGTCCT CGCCTGCTCG GCCACGCCAC CGACCTGGTG TTCGCGGGGA TCTTCAGTCG GCGGCTGCCA GCCGGCAGCA CGAAGGAACA GGCGGTCGCG CAGCTGCGTG CCACCGGCCA CGGTACCCAG GCGGACCTGC TCGCCTCGCT CGACGTGACC CCCGGTCATG GCATGGACTT CGATGCCATC GGTGTCGTGC TGCTGGGGGT CGTGGTCGTC TACGCGGTGT CCGGATTGTG CGGTGTGCTC CAGGCCCGGC TGGCGAACCT GGCCCTGCAG AGAGTGATCA GTGATCTGCG CCGCGACGTC CAGGCGAAGA TCTCGCGGTT GCCCGTCCGT TACTTCGACG GTCAGCCGCG AGGCGAGGTG CTCAGCCGGG TCACCAACGA CATCGACAAC TTCGGGCAGA GCCTGCAGCA GAGCATGTCG CAGATTGTCG CGTCGACGCT GACGATCGTG GGCGTGCTAT CGATGATGCT CTGGATCTCC TGGATCCTCG CCCTGATCGC GCTGGTCACG GTGCCAGTGT CGATCATGAT GGCGACCCGG GTCGGCAAGC TGGCTCAGCC CCAGTTTGTC GCCCAGTGGC GGATCACCGG TGGTCTCAAC GCCCATATCG AGGAGATGTA CACCGGGCAC ACGCTCGTGC GGGCGTTCGG CCGGCAGGAG GAATCCGCGG AGATCTTTCG TGAGCAGAAC GAGCGGCTCT ACGCCGCCAG TTGGCGCGCG CAGTTCATCT CCGGTCTCAT GCAGCCCTCG ATGTTGTTCA TCGGAAACCT GAACTACGTG CTGGTAGCTG TGATCGGCGG CCTGCGGGTC GCGTCCGGCT CGCTGTCGAT CGGTGACGTC CAGGCGTTCA TCCAATATTC TCGGCAGTTC AGCCAGCCGT TGTCCCAGGT TGCCAGCATG GCGAACCTGG TGCAGTCCGG GGTGGCCTCC GCGGAGCGGG TGTTCGACCT GCTCGACACC GTCGAGCAGG AACCCGACCG GGCGGTTCCG GCGCATCCGG AGCGGCTTCG TGGCCGGGTG GCCTTCGAAC GCGTCTCCTT CCGCTACGAA CCGAACAAGC CGTTGATCGA GGACCTGTCA CTTGTCGCGG AACCTGGTCA CACCGTCGCG ATCGTCGGGC CGACCGGCGC CGGCAAGACC ACTCTGATCA ACCTGCTGAT GCGCTTCTAC GAGGTCACCG GCGGACGGAT CACCTTGGAC GGGGTCGATG TCGCGGCGAT GTCGCGGGAT GAACTGCGGG CCAGCATCGG CATGGTCCTG CAGGACACCT GGCTGTTCGG CGGAACGATC GCGGAGAACA TCGCCTACGG TGCGGAGGGC GCCACCCACG AGCAGATTGT GGCGGCGGCC CGCGCCGCGC ACGTCGACCG GTTCGTCCGC ACTCTTCCCG CGGGTTACGA CACCGTGCTC GACGACGAGG GGGTCGGCGT GAGCGGCGGG GAGAAGCAGC TGATCACCAT CGCCCGCGCC TTCCTCGTGG AACCTCTGAT CCTGGTTCTC GACGAGGCGA CGAGCTCGGT GGACACCCGT ACCGAGGTCC TCATCCAACG GGCGATGTCG ACCCTGCGGG CGGGGCGGAC CGCGTTCGTC ATCGCGCATC GGCTGTCGAC CATCCGGGAC GCGGACACCA TTCTCGTGAT GGAGAACGGA GCCATCGTCG AACAGGGCAC CCACACCGAG CTCCTGGCCG CCGATGGCCC ATACTCCCGG CTGTACCAGT CCCAGTTCGC CCAGGCCGTC GTCGAGATCT GA
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Protein sequence | MSSPVPAPRR GPAPTAGPAR FFVGPGATEK SMDFAASSRR LLGLLRPQRH LLIAVVVLAT LSVGLSVIGP RLLGHATDLV FAGIFSRRLP AGSTKEQAVA QLRATGHGTQ ADLLASLDVT PGHGMDFDAI GVVLLGVVVV YAVSGLCGVL QARLANLALQ RVISDLRRDV QAKISRLPVR YFDGQPRGEV LSRVTNDIDN FGQSLQQSMS QIVASTLTIV GVLSMMLWIS WILALIALVT VPVSIMMATR VGKLAQPQFV AQWRITGGLN AHIEEMYTGH TLVRAFGRQE ESAEIFREQN ERLYAASWRA QFISGLMQPS MLFIGNLNYV LVAVIGGLRV ASGSLSIGDV QAFIQYSRQF SQPLSQVASM ANLVQSGVAS AERVFDLLDT VEQEPDRAVP AHPERLRGRV AFERVSFRYE PNKPLIEDLS LVAEPGHTVA IVGPTGAGKT TLINLLMRFY EVTGGRITLD GVDVAAMSRD ELRASIGMVL QDTWLFGGTI AENIAYGAEG ATHEQIVAAA RAAHVDRFVR TLPAGYDTVL DDEGVGVSGG EKQLITIARA FLVEPLILVL DEATSSVDTR TEVLIQRAMS TLRAGRTAFV IAHRLSTIRD ADTILVMENG AIVEQGTHTE LLAADGPYSR LYQSQFAQAV VEI
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