| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0341 |
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| Symbol | |
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| ID | 3905186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 395347 |
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| End bp | 396516 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637877670 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_479457 |
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| Protein GI | 86739057 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGGC GCCCGCTCCT GGGAGCGATA GCCCTTGCCG CGACCGTGGC GTTGACCGCG
GCGGCCTGTG GAAGTGACAG TGGTTCGTCC TCGAACGGGA AGCAGACCAT CACGATCGGC
TTCCAGGGAG TTCTCTCGGG CGACAGCCAG CAGCTCGGTC TGAACGCCCT CTACGGCGTC
CGGACGGCGA TCGCCGAGGT CAACGCGGAT GCGAGCGCGC CGTTCCAGCT CAAGCTCGTC
GAATCCGACG ATGGCGGCTC GCCGGATCAG GGCCCGACGG CAGCCCAGAA GCTGATCGAT
GACTCCAAGG TCGTCGCGGT GGTCGGCCCG ATGTTCTCCG GCGCCACCAA GGCGAGCGAG
CCGGCCTACA CCCAGGCCGG GCTGCTGTCG GTGAGCCCGT CGGCGACGAA CCCCGCGCTC
ACCACCCTGG GCTTCAAGAC CTTCTACCGG GTCATCGCCC CGGACACCGT GCAGGGCAAG
GCCGCGGCCG ACTACATCGC CACGGTGCTC AAGGCGACGA AGGTGTACTC GCTGGACGAC
AAGAGCGAGT ACGGCACGGG CCTGTCGGGT GCGCTGGAGG CCGAGCTCAA AGCCAAGGGT
GTCAACGCGA CCCACGACGG CATCAACCCG ACCAAGGACT ACACCTCCGA GGCAACGAAG
ATCATCGCTG CCGCGCCCGA GGTCCTCTAC TACTCCGGCT ACTACCCCGA GTTCGCGCTG
CTGTCGAAGG CGCTGAAGGG CAAGGGCTTC ACCGGAAAGA TCATCAGCGG TGACGGCTCG
CTCGACCCGC AGTACGTCGC GCAGGCCGGG GCCGCCGCGG CCGAGGGTGC CTACCTCACC
TGCCCCTGCG GCGACGCCAA CACCGACCCG AAGGCCGCGT CCTTCGTCGC GTCCTACAAG
AAGGTCAACA ACGGGACGAA GCCCGGCACC TACTCCGGTG AGGCCTACGA CGCCACGCTC
GCCCTCGCGG ACGTCTTCAA GAAGCTCGGC AAGGACGTCA CCCGGGAGTC CGTGACCGGC
GCGTTCGGTT CCGTGAACTT CCCCGGCATC ACCAAGACCG TGGTGTTCGA GCCCAACGGC
GAGGTCAAGG GCTCCAACGT GTTCGTCTAC CAGGTGAAGG GTGGACAGAT CACCGTTCTC
GGCAACATCG CGAACCTGGT CAAGTCCTGA
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| Protein sequence | MGRRPLLGAI ALAATVALTA AACGSDSGSS SNGKQTITIG FQGVLSGDSQ QLGLNALYGV
RTAIAEVNAD ASAPFQLKLV ESDDGGSPDQ GPTAAQKLID DSKVVAVVGP MFSGATKASE
PAYTQAGLLS VSPSATNPAL TTLGFKTFYR VIAPDTVQGK AAADYIATVL KATKVYSLDD
KSEYGTGLSG ALEAELKAKG VNATHDGINP TKDYTSEATK IIAAAPEVLY YSGYYPEFAL
LSKALKGKGF TGKIISGDGS LDPQYVAQAG AAAAEGAYLT CPCGDANTDP KAASFVASYK
KVNNGTKPGT YSGEAYDATL ALADVFKKLG KDVTRESVTG AFGSVNFPGI TKTVVFEPNG
EVKGSNVFVY QVKGGQITVL GNIANLVKS
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